This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4ipe

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (21:02, 16 November 2022) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
 +
==Crystal structure of mitochondrial Hsp90 (TRAP1) with AMPPNP==
==Crystal structure of mitochondrial Hsp90 (TRAP1) with AMPPNP==
-
<StructureSection load='4ipe' size='340' side='right' caption='[[4ipe]], [[Resolution|resolution]] 2.29&Aring;' scene=''>
+
<StructureSection load='4ipe' size='340' side='right'caption='[[4ipe]], [[Resolution|resolution]] 2.29&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4ipe]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Brachidanio_rerio Brachidanio rerio]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IPE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4IPE FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4ipe]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Danio_rerio Danio rerio]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IPE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4IPE FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">trap1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=7955 Brachidanio rerio])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ipe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ipe OCA], [https://pdbe.org/4ipe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ipe RCSB], [https://www.ebi.ac.uk/pdbsum/4ipe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ipe ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ipe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ipe OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ipe RCSB], [http://www.ebi.ac.uk/pdbsum/4ipe PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A8WFV1_DANRE A8WFV1_DANRE]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 15: Line 17:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 4ipe" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Brachidanio rerio]]
+
[[Category: Danio rerio]]
-
[[Category: Agard, D A]]
+
[[Category: Large Structures]]
-
[[Category: Lavery, L A]]
+
[[Category: Agard DA]]
-
[[Category: Partridge, J R]]
+
[[Category: Lavery LA]]
-
[[Category: Atp binding]]
+
[[Category: Partridge JR]]
-
[[Category: Atpase]]
+
-
[[Category: Chaperone]]
+
-
[[Category: Mitochondria]]
+

Current revision

Crystal structure of mitochondrial Hsp90 (TRAP1) with AMPPNP

PDB ID 4ipe

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools