1sjx
From Proteopedia
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==Three-Dimensional Structure of a Llama VHH Domain OE7 binding the cell wall protein Malf1== | ==Three-Dimensional Structure of a Llama VHH Domain OE7 binding the cell wall protein Malf1== | ||
| - | <StructureSection load='1sjx' size='340' side='right' caption='[[1sjx]], [[Resolution|resolution]] 2.20Å' scene=''> | + | <StructureSection load='1sjx' size='340' side='right'caption='[[1sjx]], [[Resolution|resolution]] 2.20Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1sjx]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[1sjx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lama_glama Lama glama]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SJX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SJX FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2Å</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1sjx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sjx OCA], [https://pdbe.org/1sjx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1sjx RCSB], [https://www.ebi.ac.uk/pdbsum/1sjx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1sjx ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sj/1sjx_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sj/1sjx_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1sjx ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
| + | <div class="pdbe-citations 1sjx" style="background-color:#fffaf0;"></div> | ||
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| + | ==See Also== | ||
| + | *[[Antibody 3D structures|Antibody 3D structures]] | ||
| + | *[[3D structures of non-human antibody|3D structures of non-human antibody]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Lama glama]] | [[Category: Lama glama]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Cambillau C]] |
| - | [[Category: | + | [[Category: Dolk E]] |
| - | [[Category: | + | [[Category: Frenken L]] |
| - | [[Category: Hulsik | + | [[Category: Hulsik DL]] |
| - | [[Category: Spinelli | + | [[Category: Spinelli S]] |
| - | + | [[Category: Verrips T]] | |
| - | [[Category: Verrips | + | [[Category: Vriend G]] |
| - | [[Category: Vriend | + | [[Category: De Haard H]] |
| - | [[Category: | + | [[Category: Van der Vaart M]] |
| - | [[Category: | + | |
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Current revision
Three-Dimensional Structure of a Llama VHH Domain OE7 binding the cell wall protein Malf1
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Categories: Lama glama | Large Structures | Cambillau C | Dolk E | Frenken L | Hulsik DL | Spinelli S | Verrips T | Vriend G | De Haard H | Van der Vaart M
