1xdf

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==Crystal structure of pathogenesis-related protein LlPR-10.2A from yellow lupine==
==Crystal structure of pathogenesis-related protein LlPR-10.2A from yellow lupine==
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<StructureSection load='1xdf' size='340' side='right' caption='[[1xdf]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
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<StructureSection load='1xdf' size='340' side='right'caption='[[1xdf]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[1xdf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lupinus_luteus Lupinus luteus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XDF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1XDF FirstGlance]. <br>
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<table><tr><td colspan='2'>[[1xdf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Lupinus_luteus Lupinus luteus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XDF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XDF FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1icx|1icx]], [[1ifv|1ifv]], [[1bv1|1bv1]], [[1fm4|1fm4]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Llpr-10.2a ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3873 Lupinus luteus])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xdf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xdf OCA], [https://pdbe.org/1xdf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xdf RCSB], [https://www.ebi.ac.uk/pdbsum/1xdf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xdf ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1xdf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xdf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1xdf RCSB], [http://www.ebi.ac.uk/pdbsum/1xdf PDBsum]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/P102A_LUPLU P102A_LUPLU] Class II ribonuclease (RNase) (By similarity). Binds to cytokinins (By similarity). Interacts with melatonin (By similarity).[UniProtKB:P52779][UniProtKB:Q9LLQ2]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xd/1xdf_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xd/1xdf_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xdf ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
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<div class="pdbe-citations 1xdf" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Large Structures]]
[[Category: Lupinus luteus]]
[[Category: Lupinus luteus]]
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[[Category: Biesiadka, J]]
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[[Category: Biesiadka J]]
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[[Category: Bujacz, G]]
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[[Category: Bujacz G]]
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[[Category: Dolot, R]]
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[[Category: Dolot R]]
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[[Category: Handschuh, L]]
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[[Category: Handschuh L]]
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[[Category: Jaskolski, M]]
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[[Category: Jaskolski M]]
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[[Category: Pasternak, O]]
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[[Category: Pasternak O]]
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[[Category: Sikorski, M M]]
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[[Category: Sikorski MM]]
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[[Category: 7-stranded antiparallel beta-sheet]]
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[[Category: Glycine-rich loop]]
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[[Category: Kinked c-terminal alpha-helix]]
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[[Category: Plant protein]]
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Current revision

Crystal structure of pathogenesis-related protein LlPR-10.2A from yellow lupine

PDB ID 1xdf

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