2d4w
From Proteopedia
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==Crystal structure of glycerol kinase from Cellulomonas sp. NT3060== | ==Crystal structure of glycerol kinase from Cellulomonas sp. NT3060== | ||
| - | <StructureSection load='2d4w' size='340' side='right' caption='[[2d4w]], [[Resolution|resolution]] 2.30Å' scene=''> | + | <StructureSection load='2d4w' size='340' side='right'caption='[[2d4w]], [[Resolution|resolution]] 2.30Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2d4w]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2d4w]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Cellulomonas_sp. Cellulomonas sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D4W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2D4W FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2d4w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d4w OCA], [https://pdbe.org/2d4w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2d4w RCSB], [https://www.ebi.ac.uk/pdbsum/2d4w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2d4w ProSAT]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d4/2d4w_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d4/2d4w_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2d4w ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Cellulomonas sp]] | [[Category: Cellulomonas sp]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Imada | + | [[Category: Imada K]] |
| - | [[Category: Inagaki | + | [[Category: Inagaki K]] |
| - | [[Category: Namba | + | [[Category: Namba K]] |
| - | [[Category: Tamura | + | [[Category: Tamura T]] |
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Current revision
Crystal structure of glycerol kinase from Cellulomonas sp. NT3060
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