2jo6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:08, 20 December 2023) (edit) (undo)
 
(15 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2jo6.gif|left|200px]]
 
-
{{Structure
+
==NMR structure of the E.coli protein NirD, Northeast Structural Genomics target ET100==
-
|PDB= 2jo6 |SIZE=350|CAPTION= <scene name='initialview01'>2jo6</scene>
+
<StructureSection load='2jo6' size='340' side='right'caption='[[2jo6]]' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND=
+
<table><tr><td colspan='2'>[[2jo6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JO6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JO6 FirstGlance]. <br>
-
|ACTIVITY= [http://en.wikipedia.org/wiki/Nitrite_reductase_(NAD(P)H) Nitrite reductase (NAD(P)H)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.7.1.4 1.7.1.4]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
|GENE= nirD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jo6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jo6 OCA], [https://pdbe.org/2jo6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jo6 RCSB], [https://www.ebi.ac.uk/pdbsum/2jo6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jo6 ProSAT], [https://www.topsan.org/Proteins/NESGC/2jo6 TOPSAN]</span></td></tr>
-
}}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/NIRD_ECOLI NIRD_ECOLI] Required for activity of the reductase.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jo/2jo6_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jo6 ConSurf].
 +
<div style="clear:both"></div>
-
'''NMR structure of the E.coli protein NirD, Northeast Structural Genomics target ET100'''
+
==See Also==
-
 
+
*[[Cytochrome c nitrite reductase|Cytochrome c nitrite reductase]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
2JO6 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JO6 OCA].
+
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Nitrite reductase (NAD(P)H)]]
+
[[Category: Large Structures]]
-
[[Category: Single protein]]
+
[[Category: Arrowsmith CH]]
-
[[Category: Arrowsmith, C H.]]
+
[[Category: Cort JR]]
-
[[Category: Cort, J R.]]
+
[[Category: Guido V]]
-
[[Category: Guido, V.]]
+
[[Category: Kennedy MA]]
-
[[Category: Kennedy, M A.]]
+
[[Category: Lukin JA]]
-
[[Category: Lukin, J A.]]
+
[[Category: Ramelot TA]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Yee AA]]
-
[[Category: Ramelot, T A.]]
+
-
[[Category: Yee, A A.]]
+
-
[[Category: 3-layer sandwich]]
+
-
[[Category: all beta]]
+
-
[[Category: isp domain]]
+
-
[[Category: nesg]]
+
-
[[Category: northeast structural genomics consortium]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi-2]]
+
-
[[Category: rieske iron-sulfur protein]]
+
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 17:43:29 2008''
+

Current revision

NMR structure of the E.coli protein NirD, Northeast Structural Genomics target ET100

PDB ID 2jo6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools