2vak

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==CRYSTAL STRUCTURE OF THE AVIAN REOVIRUS INNER CAPSID PROTEIN SIGMAA==
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<StructureSection load='2vak' size='340' side='right' caption='[[2vak]], [[Resolution|resolution]] 2.34&Aring;' scene=''>
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==Crystal structure of the avian reovirus inner capsid protein sigmaA==
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<StructureSection load='2vak' size='340' side='right'caption='[[2vak]], [[Resolution|resolution]] 2.34&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2vak]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Avian_orthoreovirus Avian orthoreovirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VAK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2VAK FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2vak]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Avian_orthoreovirus Avian orthoreovirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VAK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VAK FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.34&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2vak FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vak OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2vak RCSB], [http://www.ebi.ac.uk/pdbsum/2vak PDBsum]</span></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vak FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vak OCA], [https://pdbe.org/2vak PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vak RCSB], [https://www.ebi.ac.uk/pdbsum/2vak PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vak ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q9E6F8_9VIRU Q9E6F8_9VIRU]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/va/2vak_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/va/2vak_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2vak ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
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<div class="pdbe-citations 2vak" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
== References ==
== References ==
<references/>
<references/>
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</StructureSection>
</StructureSection>
[[Category: Avian orthoreovirus]]
[[Category: Avian orthoreovirus]]
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[[Category: Benavente, J]]
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[[Category: Large Structures]]
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[[Category: Fox, G C]]
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[[Category: Benavente J]]
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[[Category: Guardado-Calvo, P]]
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[[Category: Fox GC]]
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[[Category: Hermo-Parrado, X L]]
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[[Category: Guardado-Calvo P]]
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[[Category: Llamas-Saiz, A L]]
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[[Category: Hermo-Parrado XL]]
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[[Category: Martinez-Costas, J]]
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[[Category: Llamas-Saiz AL]]
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[[Category: Raaij, M J.Van]]
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[[Category: Martinez-Costas J]]
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[[Category: Vazquez-Iglesias, L]]
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[[Category: Vazquez-Iglesias L]]
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[[Category: Double-stranded rna binding]]
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[[Category: Van Raaij MJ]]
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[[Category: Rna]]
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[[Category: Viral protein]]
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Current revision

Crystal structure of the avian reovirus inner capsid protein sigmaA

PDB ID 2vak

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