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2ofd

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==The Crystal Structure of Sclerotium rolfsii lectin in complex with N-acetyl-D-galactosamine==
==The Crystal Structure of Sclerotium rolfsii lectin in complex with N-acetyl-D-galactosamine==
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<StructureSection load='2ofd' size='340' side='right' caption='[[2ofd]], [[Resolution|resolution]] 1.96&Aring;' scene=''>
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<StructureSection load='2ofd' size='340' side='right'caption='[[2ofd]], [[Resolution|resolution]] 1.96&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2ofd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Athelia_rolfsii Athelia rolfsii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OFD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2OFD FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2ofd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Athelia_rolfsii Athelia rolfsii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OFD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OFD FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=NGA:N-ACETYL-D-GALACTOSAMINE'>NGA</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.96&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=NGA:N-ACETYL-D-GALACTOSAMINE'>NGA</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2ofc|2ofc]], [[2ofe|2ofe]]</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ofd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ofd OCA], [https://pdbe.org/2ofd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ofd RCSB], [https://www.ebi.ac.uk/pdbsum/2ofd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ofd ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ofd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ofd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ofd RCSB], [http://www.ebi.ac.uk/pdbsum/2ofd PDBsum]</span></td></tr>
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</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
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Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/of/2ofd_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/of/2ofd_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ofd ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
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<div class="pdbe-citations 2ofd" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
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</StructureSection>
</StructureSection>
[[Category: Athelia rolfsii]]
[[Category: Athelia rolfsii]]
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[[Category: Leonidas, D D]]
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[[Category: Large Structures]]
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[[Category: Oikonomakos, N G]]
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[[Category: Leonidas DD]]
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[[Category: Zographos, S E]]
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[[Category: Oikonomakos NG]]
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[[Category: Dual specificity]]
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[[Category: Zographos SE]]
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[[Category: Lectin]]
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[[Category: Sugar binding protein]]
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Current revision

The Crystal Structure of Sclerotium rolfsii lectin in complex with N-acetyl-D-galactosamine

PDB ID 2ofd

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