2vee

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==Structure of protoglobin from Methanosarcina acetivorans C2A==
==Structure of protoglobin from Methanosarcina acetivorans C2A==
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<StructureSection load='2vee' size='340' side='right' caption='[[2vee]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
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<StructureSection load='2vee' size='340' side='right'caption='[[2vee]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2vee]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Methanosarcina_acetivorans Methanosarcina acetivorans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VEE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2VEE FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2vee]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanosarcina_acetivorans Methanosarcina acetivorans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VEE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VEE FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2veb|2veb]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2vee FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vee OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2vee RCSB], [http://www.ebi.ac.uk/pdbsum/2vee PDBsum]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vee FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vee OCA], [https://pdbe.org/2vee PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vee RCSB], [https://www.ebi.ac.uk/pdbsum/2vee PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vee ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q8TLY9_METAC Q8TLY9_METAC]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ve/2vee_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ve/2vee_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2vee ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
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<div class="pdbe-citations 2vee" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Large Structures]]
[[Category: Methanosarcina acetivorans]]
[[Category: Methanosarcina acetivorans]]
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[[Category: Alam, M]]
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[[Category: Alam M]]
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[[Category: Ascenzi, P]]
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[[Category: Ascenzi P]]
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[[Category: Bolognesi, M]]
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[[Category: Bolognesi M]]
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[[Category: Ciaccio, C]]
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[[Category: Ciaccio C]]
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[[Category: Coletta, M]]
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[[Category: Coletta M]]
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[[Category: Dewilde, S]]
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[[Category: Dewilde S]]
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[[Category: Moens, L]]
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[[Category: Moens L]]
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[[Category: Nardini, M]]
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[[Category: Nardini M]]
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[[Category: Pesce, A]]
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[[Category: Pesce A]]
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[[Category: Saito, J A]]
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[[Category: Saito JA]]
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[[Category: Thijs, L]]
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[[Category: Thijs L]]
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[[Category: Archaea protein]]
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[[Category: Hemoprotein structure]]
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[[Category: Methanogenesis]]
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[[Category: Protein matrix tunnel]]
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[[Category: Protoglobin]]
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[[Category: Transport protein]]
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Current revision

Structure of protoglobin from Methanosarcina acetivorans C2A

PDB ID 2vee

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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