2vom
From Proteopedia
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- | == | + | |
- | <StructureSection load='2vom' size='340' side='right' caption='[[2vom]], [[Resolution|resolution]] 1.85Å' scene=''> | + | ==Structural basis of human triosephosphate isomerase deficiency. Mutation E104D and correlation to solvent perturbation.== |
+ | <StructureSection load='2vom' size='340' side='right'caption='[[2vom]], [[Resolution|resolution]] 1.85Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[2vom]] is a 4 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2vom]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VOM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VOM FirstGlance]. <br> |
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85Å</td></tr> |
- | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vom FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vom OCA], [https://pdbe.org/2vom PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vom RCSB], [https://www.ebi.ac.uk/pdbsum/2vom PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vom ProSAT]</span></td></tr> | |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
+ | == Disease == | ||
+ | [https://www.uniprot.org/uniprot/TPIS_HUMAN TPIS_HUMAN] Defects in TPI1 are the cause of triosephosphate isomerase deficiency (TPI deficiency) [MIM:[https://omim.org/entry/190450 190450]. TPI deficiency is an autosomal recessive disorder. It is the most severe clinical disorder of glycolysis. It is associated with neonatal jaundice, chronic hemolytic anemia, progressive neuromuscular dysfunction, cardiomyopathy and increased susceptibility to infection. | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/TPIS_HUMAN TPIS_HUMAN] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
- | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vo/2vom_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vo/2vom_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
- | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2vom ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
+ | <div class="pdbe-citations 2vom" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
- | *[[Triose | + | *[[Triose phosphate isomerase 3D structures|Triose phosphate isomerase 3D structures]] |
== References == | == References == | ||
<references/> | <references/> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
- | [[Category: | + | [[Category: Large Structures]] |
- | [[Category: Aguirre-Lopez | + | [[Category: Aguirre-Lopez B]] |
- | [[Category: Arreola-Alemon | + | [[Category: Arreola-Alemon R]] |
- | [[Category: Costas | + | [[Category: Costas M]] |
- | [[Category: Gomez-Puyou | + | [[Category: Gomez-Puyou A]] |
- | + | [[Category: Perez-Montfort R]] | |
- | [[Category: Perez-Montfort | + | [[Category: Rodriguez-Almazan C]] |
- | [[Category: Rodriguez-Almazan | + | [[Category: Rodriguez-Larrea D]] |
- | [[Category: Rodriguez-Larrea | + | [[Category: Torres-Larios A]] |
- | [[Category: Torres-Larios | + | [[Category: De Gomez-Puyou MT]] |
- | [[Category: | + | |
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Current revision
Structural basis of human triosephosphate isomerase deficiency. Mutation E104D and correlation to solvent perturbation.
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