2nys

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:11, 28 December 2023) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2nys.gif|left|200px]]
 
-
{{Structure
+
==X-ray Crystal Structure of Protein AGR_C_3712 from Agrobacterium tumefaciens. Northeast Structural Genomics Consortium Target AtR88.==
-
|PDB= 2nys |SIZE=350|CAPTION= <scene name='initialview01'>2nys</scene>, resolution 2.70&Aring;
+
<StructureSection load='2nys' size='340' side='right'caption='[[2nys]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND=
+
<table><tr><td colspan='2'>[[2nys]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NYS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NYS FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-
|GENE= AGR_C3712 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=358 Agrobacterium tumefaciens])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
}}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2nys FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nys OCA], [https://pdbe.org/2nys PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2nys RCSB], [https://www.ebi.ac.uk/pdbsum/2nys PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2nys ProSAT], [https://www.topsan.org/Proteins/NESGC/2nys TOPSAN]</span></td></tr>
-
 
+
</table>
-
'''X-ray Crystal Structure of Protein AGR_C_3712 from Agrobacterium tumefaciens. Northeast Structural Genomics Consortium Target AtR88.'''
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q8U561_AGRFC Q8U561_AGRFC]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
2NYS is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NYS OCA].
+
Check<jmol>
-
[[Category: Agrobacterium tumefaciens]]
+
<jmolCheckbox>
-
[[Category: Single protein]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ny/2nys_consurf.spt"</scriptWhenChecked>
-
[[Category: Abashidze, M.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Acton, T B.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Cunningham, K.]]
+
</jmolCheckbox>
-
[[Category: Hunt, J F.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2nys ConSurf].
-
[[Category: Ma, L C.]]
+
<div style="clear:both"></div>
-
[[Category: Montelione, G T.]]
+
__TOC__
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
</StructureSection>
-
[[Category: Nwosu, C.]]
+
[[Category: Agrobacterium fabrum str. C58]]
-
[[Category: Seetharaman, J.]]
+
[[Category: Large Structures]]
-
[[Category: Tong, L.]]
+
[[Category: Abashidze M]]
-
[[Category: Vorobiev, S M.]]
+
[[Category: Acton TB]]
-
[[Category: Xiao, R.]]
+
[[Category: Cunningham K]]
-
[[Category: Zhao, L.]]
+
[[Category: Hunt JF]]
-
[[Category: agr_c_3712]]
+
[[Category: Ma LC]]
-
[[Category: atr88]]
+
[[Category: Montelione GT]]
-
[[Category: nesg]]
+
[[Category: Nwosu C]]
-
[[Category: northeast structural genomics consortium]]
+
[[Category: Seetharaman J]]
-
[[Category: protein structure initiative]]
+
[[Category: Tong L]]
-
[[Category: psi-2]]
+
[[Category: Vorobiev SM]]
-
[[Category: sspb]]
+
[[Category: Xiao R]]
-
[[Category: stringent starvation protein b]]
+
[[Category: Zhao L]]
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 17:52:56 2008''
+

Current revision

X-ray Crystal Structure of Protein AGR_C_3712 from Agrobacterium tumefaciens. Northeast Structural Genomics Consortium Target AtR88.

PDB ID 2nys

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2nys"
Personal tools