3cq2

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:44, 17 October 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Structure of the DTDP-4-Keto-L-Rhamnose Reductase related protein (other form) from Thermus Thermophilus HB8==
==Structure of the DTDP-4-Keto-L-Rhamnose Reductase related protein (other form) from Thermus Thermophilus HB8==
-
<StructureSection load='3cq2' size='340' side='right' caption='[[3cq2]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
+
<StructureSection load='3cq2' size='340' side='right'caption='[[3cq2]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3cq2]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CQ2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3CQ2 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3cq2]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CQ2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CQ2 FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2cu6|2cu6]], [[3cq1|3cq1]], [[3cq3|3cq3]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3cq2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cq2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3cq2 RCSB], [http://www.ebi.ac.uk/pdbsum/3cq2 PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cq2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cq2 OCA], [https://pdbe.org/3cq2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cq2 RCSB], [https://www.ebi.ac.uk/pdbsum/3cq2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cq2 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q53W28_THET8 Q53W28_THET8]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cq/3cq2_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cq/3cq2_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cq2 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Thermus thermophilus]]
+
[[Category: Large Structures]]
-
[[Category: Chen, L]]
+
[[Category: Thermus thermophilus HB8]]
-
[[Category: Ebihara, A]]
+
[[Category: Chen L]]
-
[[Category: Jeyakanthan, J]]
+
[[Category: Ebihara A]]
-
[[Category: Kanaujia, S P]]
+
[[Category: Jeyakanthan J]]
-
[[Category: Kitamura, Y]]
+
[[Category: Kanaujia SP]]
-
[[Category: Kuramitsu, S]]
+
[[Category: Kitamura Y]]
-
[[Category: Liu, Z J]]
+
[[Category: Kuramitsu S]]
-
[[Category: Structural genomic]]
+
[[Category: Liu ZJ]]
-
[[Category: Satoh, S]]
+
[[Category: Satoh S]]
-
[[Category: Sekar, K]]
+
[[Category: Sekar K]]
-
[[Category: Wang, B C]]
+
[[Category: Wang BC]]
-
[[Category: Yokoyama, S]]
+
[[Category: Yokoyama S]]
-
[[Category: Dtdp-4-keto-l-rhamnose reductase]]
+
-
[[Category: National project on protein structural and functional analyse]]
+
-
[[Category: Nppsfa]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Rsgi]]
+

Current revision

Structure of the DTDP-4-Keto-L-Rhamnose Reductase related protein (other form) from Thermus Thermophilus HB8

PDB ID 3cq2

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools