2wiz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:59, 13 December 2023) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
==CRYSTAL STRUCTURES OF HOLLIDAY JUNCTION RESOLVASES FROM ARCHAEOGLOBUS FULGIDUS BOUND TO DNA SUBSTRATE==
+
 
-
<StructureSection load='2wiz' size='340' side='right' caption='[[2wiz]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
+
==Crystal structures of Holliday junction resolvases from Archaeoglobus fulgidus bound to DNA substrate==
 +
<StructureSection load='2wiz' size='340' side='right'caption='[[2wiz]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2wiz]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WIZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WIZ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2wiz]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus_DSM_4304 Archaeoglobus fulgidus DSM 4304] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WIZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WIZ FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2wiw|2wiw]], [[2wcz|2wcz]], [[2wcw|2wcw]], [[2wj0|2wj0]]</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.3&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wiz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wiz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2wiz RCSB], [http://www.ebi.ac.uk/pdbsum/2wiz PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wiz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wiz OCA], [https://pdbe.org/2wiz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wiz RCSB], [https://www.ebi.ac.uk/pdbsum/2wiz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wiz ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/HJC_ARCFU HJC_ARCFU] A structure-specific endonuclease that resolves Holliday junction (HJ) intermediates during genetic recombination. Cleaves 4-way DNA junctions introducing paired nicks in opposing strands, leaving a 5'-terminal phosphate and a 3'-terminal hydroxyl group that are ligated to produce recombinant products.[HAMAP-Rule:MF_01490]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wi/2wiz_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wi/2wiz_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2wiz ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Resolvase|Resolvase]]
+
*[[Resolvase 3D structures|Resolvase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Archaeoglobus fulgidus]]
+
[[Category: Archaeoglobus fulgidus DSM 4304]]
-
[[Category: Basquin, J]]
+
[[Category: Large Structures]]
-
[[Category: Carolis, C]]
+
[[Category: Synthetic construct]]
-
[[Category: Koehler, C]]
+
[[Category: Basquin J]]
-
[[Category: Sauter, C]]
+
[[Category: Carolis C]]
-
[[Category: Suck, D]]
+
[[Category: Koehler C]]
-
[[Category: Toeroe, I]]
+
[[Category: Sauter C]]
-
[[Category: Dna binding protein]]
+
[[Category: Suck D]]
-
[[Category: Holliday junction resolvase]]
+
[[Category: Toeroe I]]
-
[[Category: Hydrolase]]
+
-
[[Category: Hydrolase dna complex]]
+
-
[[Category: Hydrolase-dna complex]]
+
-
[[Category: Type ii restriction endonuclease]]
+

Current revision

Crystal structures of Holliday junction resolvases from Archaeoglobus fulgidus bound to DNA substrate

PDB ID 2wiz

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools