2p12

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (01:18, 21 November 2024) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2p12.jpg|left|200px]]
 
-
{{Structure
+
==Crystal structure of protein of unknown function DUF402 from Rhodococcus sp. RHA1==
-
|PDB= 2p12 |SIZE=350|CAPTION= <scene name='initialview01'>2p12</scene>, resolution 1.63&Aring;
+
<StructureSection load='2p12' size='340' side='right'caption='[[2p12]], [[Resolution|resolution]] 1.63&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene> and <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>
+
<table><tr><td colspan='2'>[[2p12]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodococcus_jostii_RHA1 Rhodococcus jostii RHA1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P12 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P12 FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.63&#8491;</td></tr>
-
|GENE= RHA1_ro00977 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1831 Rhodococcus sp.])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
}}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p12 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p12 OCA], [https://pdbe.org/2p12 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p12 RCSB], [https://www.ebi.ac.uk/pdbsum/2p12 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p12 ProSAT], [https://www.topsan.org/Proteins/MCSG/2p12 TOPSAN]</span></td></tr>
-
 
+
</table>
-
'''Crystal structure of protein of unknown function DUF402 from Rhodococcus sp. RHA1'''
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
==About this Structure==
+
<jmolCheckbox>
-
2P12 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Rhodococcus_sp. Rhodococcus sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P12 OCA].
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p1/2p12_consurf.spt"</scriptWhenChecked>
-
[[Category: Rhodococcus sp.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Single protein]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Edwards, A.]]
+
</jmolCheckbox>
-
[[Category: Evdokimova, E.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p12 ConSurf].
-
[[Category: Joachimiak, A.]]
+
<div style="clear:both"></div>
-
[[Category: Kim, Y.]]
+
__TOC__
-
[[Category: Kudritska, M.]]
+
</StructureSection>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Category: Large Structures]]
-
[[Category: Savchenko, A.]]
+
[[Category: Rhodococcus jostii RHA1]]
-
[[Category: ACY]]
+
[[Category: Edwards A]]
-
[[Category: GOL]]
+
[[Category: Evdokimova E]]
-
[[Category: apc7392]]
+
[[Category: Joachimiak A]]
-
[[Category: beta-barrel]]
+
[[Category: Kim Y]]
-
[[Category: mcsg]]
+
[[Category: Kudritska M]]
-
[[Category: midwest center for structural genomic]]
+
[[Category: Savchenko A]]
-
[[Category: protein structure initiative]]
+
-
[[Category: psi-2]]
+
-
[[Category: rhodococcus sp. rha1]]
+
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:07:09 2008''
+

Current revision

Crystal structure of protein of unknown function DUF402 from Rhodococcus sp. RHA1

PDB ID 2p12

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools