2p77

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:59, 25 October 2023) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2p77.jpg|left|200px]]
 
-
{{Structure
+
==Crystal structure of TTHB049 from Thermus thermophilus HB8==
-
|PDB= 2p77 |SIZE=350|CAPTION= <scene name='initialview01'>2p77</scene>, resolution 1.90&Aring;
+
<StructureSection load='2p77' size='340' side='right'caption='[[2p77]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=NA:SODIUM+ION'>NA</scene> and <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>
+
<table><tr><td colspan='2'>[[2p77]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P77 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P77 FirstGlance]. <br>
-
|ACTIVITY= [http://en.wikipedia.org/wiki/Alpha-ribazole_phosphatase Alpha-ribazole phosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.3.73 3.1.3.73]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
|GENE=
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
}}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p77 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p77 OCA], [https://pdbe.org/2p77 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p77 RCSB], [https://www.ebi.ac.uk/pdbsum/2p77 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p77 ProSAT], [https://www.topsan.org/Proteins/RSGI/2p77 TOPSAN]</span></td></tr>
-
 
+
</table>
-
'''Crystal structure of TTHB049 from Thermus thermophilus HB8'''
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q53WB3_THET8 Q53WB3_THET8]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
2P77 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P77 OCA].
+
Check<jmol>
-
[[Category: Alpha-ribazole phosphatase]]
+
<jmolCheckbox>
-
[[Category: Single protein]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p7/2p77_consurf.spt"</scriptWhenChecked>
-
[[Category: Thermus thermophilus]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Kageyama, Y.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Kunishima, N.]]
+
</jmolCheckbox>
-
[[Category: Matsuura, Y.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p77 ConSurf].
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
<div style="clear:both"></div>
-
[[Category: Sugahara, M.]]
+
__TOC__
-
[[Category: Taketa, M.]]
+
</StructureSection>
-
[[Category: GOL]]
+
[[Category: Large Structures]]
-
[[Category: NA]]
+
[[Category: Thermus thermophilus HB8]]
-
[[Category: hydrolase]]
+
[[Category: Kageyama Y]]
-
[[Category: national project on protein structural and functional analyse]]
+
[[Category: Kunishima N]]
-
[[Category: nppsfa]]
+
[[Category: Matsuura Y]]
-
[[Category: riken structural genomics/proteomics initiative]]
+
[[Category: Sugahara M]]
-
[[Category: rsgi]]
+
[[Category: Taketa M]]
-
[[Category: structural genomic]]
+
-
[[Category: thermus thermophilus hb8]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:09:34 2008''
+

Current revision

Crystal structure of TTHB049 from Thermus thermophilus HB8

PDB ID 2p77

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools