2pcq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:44, 9 March 2022) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2pcq.jpg|left|200px]]
 
-
{{Structure
+
==Crystal structure of putative dihydrodipicolinate synthase (TTHA0737) from Thermus Thermophilus HB8==
-
|PDB= 2pcq |SIZE=350|CAPTION= <scene name='initialview01'>2pcq</scene>, resolution 2.10&Aring;
+
<StructureSection load='2pcq' size='340' side='right'caption='[[2pcq]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=K:POTASSIUM+ION'>K</scene> and <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>
+
<table><tr><td colspan='2'>[[2pcq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PCQ FirstGlance]. <br>
-
|ACTIVITY= [http://en.wikipedia.org/wiki/Dihydrodipicolinate_synthase Dihydrodipicolinate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.52 4.2.1.52]
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene></td></tr>
-
|GENE=
+
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
}}
+
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/4-hydroxy-tetrahydrodipicolinate_synthase 4-hydroxy-tetrahydrodipicolinate synthase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.3.3.7 4.3.3.7] </span></td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pcq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pcq OCA], [https://pdbe.org/2pcq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pcq RCSB], [https://www.ebi.ac.uk/pdbsum/2pcq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pcq ProSAT], [https://www.topsan.org/Proteins/RSGI/2pcq TOPSAN]</span></td></tr>
-
'''Crystal structure of putative dihidrodipicolinate synthase (TTHA0737) from Thermus Thermophilus HB8'''
+
</table>
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
2PCQ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCQ OCA].
+
<jmolCheckbox>
-
[[Category: Dihydrodipicolinate synthase]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pc/2pcq_consurf.spt"</scriptWhenChecked>
-
[[Category: Single protein]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Thermus thermophilus]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Ebihara, A.]]
+
</jmolCheckbox>
-
[[Category: Jeyakanthan, J.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pcq ConSurf].
-
[[Category: Kanaujia, S P.]]
+
<div style="clear:both"></div>
-
[[Category: Kitamura, Y.]]
+
__TOC__
-
[[Category: Kuramitsu, S.]]
+
</StructureSection>
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
[[Category: 4-hydroxy-tetrahydrodipicolinate synthase]]
-
[[Category: Ranjani, C Vasuki.]]
+
[[Category: Large Structures]]
-
[[Category: Sekar, K.]]
+
[[Category: Thet8]]
-
[[Category: Shinkai, A.]]
+
[[Category: Ebihara, A]]
-
[[Category: Shiro, Y.]]
+
[[Category: Jeyakanthan, J]]
-
[[Category: Yokoyama, S.]]
+
[[Category: Kanaujia, S P]]
-
[[Category: GOL]]
+
[[Category: Kitamura, Y]]
-
[[Category: K]]
+
[[Category: Kuramitsu, S]]
-
[[Category: dihydrodipicoliante]]
+
[[Category: Structural genomic]]
-
[[Category: lyase]]
+
[[Category: Ranjani, C Vasuki]]
-
[[Category: lysine biosynthesis]]
+
[[Category: Sekar, K]]
-
[[Category: national project on protein structural and functional analyse]]
+
[[Category: Shinkai, A]]
-
[[Category: nppsfa]]
+
[[Category: Shiro, Y]]
-
[[Category: riken structural genomics/proteomics initiative]]
+
[[Category: Yokoyama, S]]
-
[[Category: rsgi]]
+
[[Category: Dihydrodipicoliante]]
-
[[Category: structural genomic]]
+
[[Category: Lyase]]
-
[[Category: synthase]]
+
[[Category: Lysine biosynthesis]]
-
 
+
[[Category: National project on protein structural and functional analyse]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:11:34 2008''
+
[[Category: Nppsfa]]
 +
[[Category: Rsgi]]
 +
[[Category: Synthase]]

Current revision

Crystal structure of putative dihydrodipicolinate synthase (TTHA0737) from Thermus Thermophilus HB8

PDB ID 2pcq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2pcq"
Personal tools