We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.

2pgs

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:28, 30 October 2024) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2pgs.gif|left|200px]]
 
-
{{Structure
+
==Crystal structure of a putative deoxyguanosinetriphosphate triphosphohydrolase from Pseudomonas syringae pv. phaseolicola 1448A==
-
|PDB= 2pgs |SIZE=350|CAPTION= <scene name='initialview01'>2pgs</scene>, resolution 2.35&Aring;
+
<StructureSection load='2pgs' size='340' side='right'caption='[[2pgs]], [[Resolution|resolution]] 2.35&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND=
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PGS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PGS FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.35&#8491;</td></tr>
-
|GENE= PSPPH_2088 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=264730 Pseudomonas syringae pv. phaseolicola 1448A])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
}}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pgs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pgs OCA], [https://pdbe.org/2pgs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pgs RCSB], [https://www.ebi.ac.uk/pdbsum/2pgs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pgs ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2pgs TOPSAN]</span></td></tr>
-
 
+
</table>
-
'''Crystal structure of a putative deoxyguanosinetriphosphate triphosphohydrolase from Pseudomonas syringae pv. phaseolicola 1448A'''
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
==About this Structure==
+
<jmolCheckbox>
-
2PGS is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_syringae_pv._phaseolicola_1448a Pseudomonas syringae pv. phaseolicola 1448a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PGS OCA].
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pg/2pgs_consurf.spt"</scriptWhenChecked>
-
[[Category: Pseudomonas syringae pv. phaseolicola 1448a]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Single protein]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Burley, S K.]]
+
</jmolCheckbox>
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pgs ConSurf].
-
[[Category: Rao, K N.]]
+
<div style="clear:both"></div>
-
[[Category: Swaminathan, S.]]
+
__TOC__
-
[[Category: 10395g]]
+
</StructureSection>
-
[[Category: crystal structure]]
+
[[Category: Large Structures]]
-
[[Category: deoxyguanosinetriphosphate triphsphohydrolase]]
+
[[Category: Burley SK]]
-
[[Category: new york structural genomix research consortium]]
+
[[Category: Rao KN]]
-
[[Category: nysgxrc]]
+
[[Category: Swaminathan S]]
-
[[Category: protein structure initiative]]
+
-
[[Category: pseudomonas syringae pv. phaseolicola 1448a]]
+
-
[[Category: psi-2]]
+
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:12:50 2008''
+

Current revision

Crystal structure of a putative deoxyguanosinetriphosphate triphosphohydrolase from Pseudomonas syringae pv. phaseolicola 1448A

PDB ID 2pgs

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools