4xub
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 4xub is ON HOLD Authors: Chaikuad, A., Felletar, I., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Knapp, S., Structural Genomics Con...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Crystal Structure of the bromodomain of human BAZ2B in complex with BAZ2-ICR chemical probe== | |
| + | <StructureSection load='4xub' size='340' side='right'caption='[[4xub]], [[Resolution|resolution]] 1.98Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[4xub]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4XUB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4XUB FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.98Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=43D:4-{4-(1-METHYL-1H-PYRAZOL-4-YL)-1-[2-(4-METHYL-1H-1,2,3-TRIAZOL-1-YL)ETHYL]-1H-IMIDAZOL-5-YL}BENZONITRILE'>43D</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4xub FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4xub OCA], [https://pdbe.org/4xub PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4xub RCSB], [https://www.ebi.ac.uk/pdbsum/4xub PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4xub ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/BAZ2B_HUMAN BAZ2B_HUMAN] May play a role in transcriptional regulation interacting with ISWI. | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | The bromodomain containing proteins BAZ2A/B play essential roles in chromatin remodeling and regulation of noncoding RNAs. We present the structure based discovery of a potent, selective, and cell active inhibitor 13 (BAZ2-ICR) of the BAZ2A/B bromodomains through rapid optimization of a weakly potent starting point. A key feature of the presented inhibitors is an intramolecular aromatic stacking interaction that efficiently occupies the shallow bromodomain pockets. 13 represents an excellent chemical probe for functional studies of the BAZ2 bromodomains in vitro and in vivo. | ||
| - | + | Structure Enabled Design of BAZ2-ICR, A Chemical Probe Targeting the Bromodomains of BAZ2A and BAZ2B.,Drouin L, McGrath S, Vidler LR, Chaikuad A, Monteiro O, Tallant C, Philpott M, Rogers C, Fedorov O, Liu M, Akhtar W, Hayes A, Raynaud F, Muller S, Knapp S, Hoelder S J Med Chem. 2015 Feb 26. PMID:25719566<ref>PMID:25719566</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| - | [[Category: | + | <div class="pdbe-citations 4xub" style="background-color:#fffaf0;"></div> |
| - | [[Category: | + | |
| - | [[Category: Bountra | + | ==See Also== |
| - | [[Category: | + | *[[Bromodomain adjacent to zinc finger 3D structures|Bromodomain adjacent to zinc finger 3D structures]] |
| - | [[Category: | + | == References == |
| - | [[Category: | + | <references/> |
| - | [[Category: | + | __TOC__ |
| - | [[Category: | + | </StructureSection> |
| + | [[Category: Homo sapiens]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Arrowsmith CH]] | ||
| + | [[Category: Bountra C]] | ||
| + | [[Category: Chaikuad A]] | ||
| + | [[Category: Edwards AM]] | ||
| + | [[Category: Felletar I]] | ||
| + | [[Category: Knapp S]] | ||
| + | [[Category: Von Delft F]] | ||
Current revision
Crystal Structure of the bromodomain of human BAZ2B in complex with BAZ2-ICR chemical probe
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