This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4toc

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:21, 27 September 2023) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
 +
==2.25A resolution structure of Iron Bound BfrB (Q151L) from Pseudomonas aeruginosa==
==2.25A resolution structure of Iron Bound BfrB (Q151L) from Pseudomonas aeruginosa==
-
<StructureSection load='4toc' size='340' side='right' caption='[[4toc]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
+
<StructureSection load='4toc' size='340' side='right'caption='[[4toc]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4toc]] is a 24 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4TOC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4TOC FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4toc]] is a 24 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4TOC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4TOC FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4to9|4to9]], [[4toa|4toa]], [[4tob|4tob]], [[4tod|4tod]], [[4toe|4toe]], [[4tof|4tof]], [[4tog|4tog]], [[4toh|4toh]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ferroxidase Ferroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.16.3.1 1.16.3.1] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4toc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4toc OCA], [https://pdbe.org/4toc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4toc RCSB], [https://www.ebi.ac.uk/pdbsum/4toc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4toc ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4toc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4toc OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4toc RCSB], [http://www.ebi.ac.uk/pdbsum/4toc PDBsum]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/Q9HY79_PSEAE Q9HY79_PSEAE]] Iron-storage protein (By similarity). Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex (By similarity).[PIRNR:PIRNR002560]
+
[https://www.uniprot.org/uniprot/Q9HY79_PSEAE Q9HY79_PSEAE] Iron-storage protein (By similarity). Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex (By similarity).[PIRNR:PIRNR002560]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 18: Line 18:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 4toc" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Ferritin 3D structures|Ferritin 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Ferroxidase]]
+
[[Category: Large Structures]]
-
[[Category: Battaile, K P]]
+
[[Category: Pseudomonas aeruginosa PAO1]]
-
[[Category: Eshelman, K]]
+
[[Category: Battaile KP]]
-
[[Category: Kumar, R]]
+
[[Category: Eshelman K]]
-
[[Category: Lovell, S]]
+
[[Category: Kumar R]]
-
[[Category: Rivera, M]]
+
[[Category: Lovell S]]
-
[[Category: Yao, H]]
+
[[Category: Rivera M]]
-
[[Category: Electron transport]]
+
[[Category: Yao H]]
-
[[Category: Iron binding]]
+
-
[[Category: Iron mobilization]]
+
-
[[Category: Iron storage]]
+
-
[[Category: Oxidoreductase]]
+

Current revision

2.25A resolution structure of Iron Bound BfrB (Q151L) from Pseudomonas aeruginosa

PDB ID 4toc

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4toc"
Personal tools