4y6k
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 4y6k is ON HOLD Authors: Dang,Shangyu, Wu,Shenjie, Wang,Jiawei, Shi,Yigong Description: Category: Unreleased Structures [[Category: Dang,Shang...) |
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- | '''Unreleased structure''' | ||
- | + | ==Complex structure of presenilin homologue PSH bound to an inhibitor== | |
+ | <StructureSection load='4y6k' size='340' side='right'caption='[[4y6k]], [[Resolution|resolution]] 3.85Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[4y6k]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanoculleus_marisnigri_JR1 Methanoculleus marisnigri JR1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Y6K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4Y6K FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.855Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=4B5:N-{(2R,4S,5S)-2-BENZYL-5-[(TERT-BUTOXYCARBONYL)AMINO]-4-HYDROXY-6-PHENYLHEXANOYL}-L-LEUCYL-L-PHENYLALANINAMIDE'>4B5</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4y6k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4y6k OCA], [https://pdbe.org/4y6k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4y6k RCSB], [https://www.ebi.ac.uk/pdbsum/4y6k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4y6k ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/A3CWV0_METMJ A3CWV0_METMJ] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Aberrant cleavage of amyloid precursor protein (APP) by gamma-secretase contributes to the development of Alzheimer's disease. More than 200 disease-derived mutations have been identified in presenilin (the catalytic subunit of gamma-secretase), making modulation of gamma-secretase activity a potentially attractive therapeutic opportunity. Unfortunately, the technical challenges in dealing with intact gamma-secretase have hindered discovery of modulators and demand a convenient substitute approach. Here we report that, similar to gamma-secretase, the archaeal presenilin homolog PSH faithfully processes the substrate APP C99 into Abeta42, Abeta40, and Abeta38. The molar ratio of the cleavage products Abeta42 over Abeta40 by PSH is nearly identical to that by gamma-secretase. The proteolytic activity of PSH is specifically suppressed by presenilin-specific inhibitors. Known modulators of gamma-secretase also modulate PSH similarly in terms of the Abeta42/Abeta40 ratio. Structural analysis reveals association of a known gamma-secretase inhibitor with PSH between its two catalytic aspartate residues. These findings identify PSH as a surrogate protease for the screening of agents that may regulate the protease activity and the cleavage preference of gamma-secretase. | ||
- | + | Cleavage of amyloid precursor protein by an archaeal presenilin homologue PSH.,Dang S, Wu S, Wang J, Li H, Huang M, He W, Li YM, Wong CC, Shi Y Proc Natl Acad Sci U S A. 2015 Mar 2. pii: 201502150. PMID:25733893<ref>PMID:25733893</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
- | [[Category: Dang | + | <div class="pdbe-citations 4y6k" style="background-color:#fffaf0;"></div> |
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Methanoculleus marisnigri JR1]] | ||
+ | [[Category: Dang S]] | ||
+ | [[Category: Shi Y]] | ||
+ | [[Category: Wang J]] | ||
+ | [[Category: Wu S]] |
Current revision
Complex structure of presenilin homologue PSH bound to an inhibitor
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