This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4of4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:55, 8 November 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==X-ray structure of unliganded uridine phosphorylase from Yersinia pseudotuberculosis at 1.4 A resolution==
==X-ray structure of unliganded uridine phosphorylase from Yersinia pseudotuberculosis at 1.4 A resolution==
-
<StructureSection load='4of4' size='340' side='right' caption='[[4of4]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
+
<StructureSection load='4of4' size='340' side='right'caption='[[4of4]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4of4]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4OF4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4OF4 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4of4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pseudotuberculosis Yersinia pseudotuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4OF4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4OF4 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4i2v|4i2v]], [[4jp5|4jp5]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Uridine_phosphorylase Uridine phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.3 2.4.2.3] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4of4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4of4 OCA], [https://pdbe.org/4of4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4of4 RCSB], [https://www.ebi.ac.uk/pdbsum/4of4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4of4 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4of4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4of4 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4of4 RCSB], [http://www.ebi.ac.uk/pdbsum/4of4 PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q7AZX0_YERPU Q7AZX0_YERPU]
 +
 +
==See Also==
 +
*[[Uridine phosphorylase 3D structures|Uridine phosphorylase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Uridine phosphorylase]]
+
[[Category: Large Structures]]
-
[[Category: Balaev, V V]]
+
[[Category: Yersinia pseudotuberculosis]]
-
[[Category: Betzel, C]]
+
[[Category: Balaev VV]]
-
[[Category: Gabdulkhakov, A G]]
+
[[Category: Betzel C]]
-
[[Category: Lashkov, A A]]
+
[[Category: Gabdulkhakov AG]]
-
[[Category: Mikhailov, A M]]
+
[[Category: Lashkov AA]]
-
[[Category: Phosphate ion]]
+
[[Category: Mikhailov AM]]
-
[[Category: Pyrimidine base]]
+
-
[[Category: Rossmann fold]]
+
-
[[Category: Transferase]]
+

Current revision

X-ray structure of unliganded uridine phosphorylase from Yersinia pseudotuberculosis at 1.4 A resolution

PDB ID 4of4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools