This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4mzx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (16:45, 20 September 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal Structure of Benzoylformate Decarboxylase Mutant T377L/A460Y==
==Crystal Structure of Benzoylformate Decarboxylase Mutant T377L/A460Y==
-
<StructureSection load='4mzx' size='340' side='right' caption='[[4mzx]], [[Resolution|resolution]] 1.56&Aring;' scene=''>
+
<StructureSection load='4mzx' size='340' side='right'caption='[[4mzx]], [[Resolution|resolution]] 1.56&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4mzx]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MZX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4MZX FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4mzx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MZX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4MZX FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=TZD:2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL+TRIHYDROGEN+DIPHOSPHATE'>TZD</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.558&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Benzoylformate_decarboxylase Benzoylformate decarboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.7 4.1.1.7] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=TZD:2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL+TRIHYDROGEN+DIPHOSPHATE'>TZD</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4mzx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4mzx OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4mzx RCSB], [http://www.ebi.ac.uk/pdbsum/4mzx PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4mzx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4mzx OCA], [https://pdbe.org/4mzx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4mzx RCSB], [https://www.ebi.ac.uk/pdbsum/4mzx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4mzx ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/MDLC_PSEPU MDLC_PSEPU]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Benzoylformate decarboxylase]]
+
[[Category: Large Structures]]
-
[[Category: Andrews, F H]]
+
[[Category: Pseudomonas putida]]
-
[[Category: McLeish, M J]]
+
[[Category: Andrews FH]]
-
[[Category: Lyase]]
+
[[Category: McLeish MJ]]
-
[[Category: Thdp]]
+

Current revision

Crystal Structure of Benzoylformate Decarboxylase Mutant T377L/A460Y

PDB ID 4mzx

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools