4x5u

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==X-ray crystal structure of CagL at pH 4.2==
==X-ray crystal structure of CagL at pH 4.2==
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<StructureSection load='4x5u' size='340' side='right' caption='[[4x5u]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
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<StructureSection load='4x5u' size='340' side='right'caption='[[4x5u]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[4x5u]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4X5U OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4X5U FirstGlance]. <br>
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<table><tr><td colspan='2'>[[4x5u]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori_26695 Helicobacter pylori 26695]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4X5U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4X5U FirstGlance]. <br>
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</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3zci|3zci]], [[4cii|4cii]]</td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4x5u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4x5u OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4x5u RCSB], [http://www.ebi.ac.uk/pdbsum/4x5u PDBsum]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4x5u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4x5u OCA], [https://pdbe.org/4x5u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4x5u RCSB], [https://www.ebi.ac.uk/pdbsum/4x5u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4x5u ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/O25272_HELPY O25272_HELPY]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Arginine-Aspartate-Glycine (RGD) motifs are recognized by integrins to bridge cells to one another and the extracellular matrix. RGD motifs typically reside in exposed loop conformations. X-ray crystal structures of the Helicobacter pylori protein CagL revealed that RGD motifs can also exist in helical regions of proteins. Interactions between CagL and host gastric epithelial cell via integrins are required for the translocation of the bacterial oncoprotein CagA. Here, we have investigated the molecular basis of the CagL-host cell interactions using structural, biophysical and functional analyses. We solved an X-ray crystal structure of CagL that revealed conformational changes induced by low pH not present in previous structures. Using analytical ultracentrifugation, we found that pH-induced conformational changes in CagL occur in solution and not just in the crystalline environment. By designing numerous CagL mutants based on all available crystal structures, we probed the functional roles of CagL conformational changes on cell surface integrin engagement. Together, our data indicate that the helical RGD motif in CagL is buried by a neighboring helix at low pH to inhibit CagL binding to integrin, while at neutral pH the neighboring helix is displaced to allow integrin access to the CagL RGD motif. This novel molecular mechanism of regulating integrin-RGD motif interactions by changes in the chemical environment provides new insight to H. pylori-mediated oncogenesis.
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Integrin engagement by the helical RGD motif of the Helicobacter pylori CagL protein is regulated by pH-induced displacement of a neighboring helix.,Bonsor DA, Pham KT, Beadenkopf R, Diederichs K, Haas R, Beckett D, Fischer W, Sundberg EJ J Biol Chem. 2015 Apr 2. pii: jbc.M115.641829. PMID:25837254<ref>PMID:25837254</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 4x5u" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Bonsor, D A]]
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[[Category: Helicobacter pylori 26695]]
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[[Category: Diederichs, K]]
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[[Category: Large Structures]]
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[[Category: Sundberg, E J]]
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[[Category: Bonsor DA]]
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[[Category: Cell adhesion]]
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[[Category: Diederichs K]]
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[[Category: Integrin]]
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[[Category: Sundberg EJ]]
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[[Category: Rgd motif]]
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[[Category: Type iv secretion system]]
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X-ray crystal structure of CagL at pH 4.2

PDB ID 4x5u

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