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2yv2

From Proteopedia

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[[Image:2yv2.gif|left|200px]]
 
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{{Structure
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==Crystal Structure of Succinyl-CoA Synthetase Alpha Chain from Aeropyrum pernix K1==
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|PDB= 2yv2 |SIZE=350|CAPTION= <scene name='initialview01'>2yv2</scene>, resolution 2.20&Aring;
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<StructureSection load='2yv2' size='340' side='right'caption='[[2yv2]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND=
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<table><tr><td colspan='2'>[[2yv2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aeropyrum_pernix_K1 Aeropyrum pernix K1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YV2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YV2 FirstGlance]. <br>
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|ACTIVITY= [http://en.wikipedia.org/wiki/Succinate--CoA_ligase_(ADP-forming) Succinate--CoA ligase (ADP-forming)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.2.1.5 6.2.1.5]
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
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|GENE= sucD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=56636 Aeropyrum pernix])
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yv2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yv2 OCA], [https://pdbe.org/2yv2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yv2 RCSB], [https://www.ebi.ac.uk/pdbsum/2yv2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yv2 ProSAT], [https://www.topsan.org/Proteins/RSGI/2yv2 TOPSAN]</span></td></tr>
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}}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q9YD40_AERPE Q9YD40_AERPE]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yv/2yv2_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2yv2 ConSurf].
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<div style="clear:both"></div>
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'''Crystal Structure of Succinyl-CoA Synthetase Alpha Chain from Aeropyrum pernix K1'''
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==See Also==
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*[[Succinyl-CoA synthetase 3D structures|Succinyl-CoA synthetase 3D structures]]
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__TOC__
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==About this Structure==
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</StructureSection>
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2YV2 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Aeropyrum_pernix Aeropyrum pernix]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YV2 OCA].
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[[Category: Aeropyrum pernix K1]]
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[[Category: Aeropyrum pernix]]
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[[Category: Large Structures]]
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[[Category: Single protein]]
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[[Category: Kuramitsu S]]
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[[Category: Succinate--CoA ligase (ADP-forming)]]
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[[Category: Niwa H]]
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[[Category: Kuramitsu, S.]]
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[[Category: Yokoyama S]]
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[[Category: Niwa, H.]]
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[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
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[[Category: Yokoyama, S.]]
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[[Category: coa-binding domain]]
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[[Category: ligase]]
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[[Category: national project on protein structural and functional analyse]]
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[[Category: nppsfa]]
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[[Category: riken structural genomics/proteomics initiative]]
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[[Category: rsgi]]
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[[Category: structural genomic]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:49:32 2008''
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Current revision

Crystal Structure of Succinyl-CoA Synthetase Alpha Chain from Aeropyrum pernix K1

PDB ID 2yv2

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