2ywj

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:55, 13 March 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2ywj.jpg|left|200px]]
 
-
{{Structure
+
==Crystal structure of uncharacterized conserved protein from Methanocaldococcus jannaschii==
-
|PDB= 2ywj |SIZE=350|CAPTION= <scene name='initialview01'>2ywj</scene>, resolution 1.90&Aring;
+
<StructureSection load='2ywj' size='340' side='right'caption='[[2ywj]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND=
+
<table><tr><td colspan='2'>[[2ywj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii_DSM_2661 Methanocaldococcus jannaschii DSM 2661]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YWJ FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
|GENE=
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ywj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ywj OCA], [https://pdbe.org/2ywj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ywj RCSB], [https://www.ebi.ac.uk/pdbsum/2ywj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ywj ProSAT], [https://www.topsan.org/Proteins/RSGI/2ywj TOPSAN]</span></td></tr>
-
}}
+
</table>
-
 
+
== Function ==
-
'''Crystal structure of uncharacterized conserved protein from Methanocaldococcus jannaschii'''
+
[https://www.uniprot.org/uniprot/PDXT_METJA PDXT_METJA] Involved in the hydrolysis of glutamine to glutamate and ammonia. Channels an ammonia molecule to PdxS (By similarity).
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
2YWJ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWJ OCA].
+
<jmolCheckbox>
-
[[Category: Methanocaldococcus jannaschii]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yw/2ywj_consurf.spt"</scriptWhenChecked>
-
[[Category: Single protein]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Ebihara, A.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Kuramitsu, S.]]
+
</jmolCheckbox>
-
[[Category: Manzoku, M.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ywj ConSurf].
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
<div style="clear:both"></div>
-
[[Category: Yokoyama, S.]]
+
__TOC__
-
[[Category: national project on protein structural and functional analyse]]
+
</StructureSection>
-
[[Category: nppsfa]]
+
[[Category: Large Structures]]
-
[[Category: riken structural genomics/proteomics initiative]]
+
[[Category: Methanocaldococcus jannaschii DSM 2661]]
-
[[Category: rsgi]]
+
[[Category: Ebihara A]]
-
[[Category: structural genomic]]
+
[[Category: Kuramitsu S]]
-
[[Category: transferase]]
+
[[Category: Manzoku M]]
-
[[Category: uncharacterized conserved protein]]
+
[[Category: Yokoyama S]]
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:49:51 2008''
+

Current revision

Crystal structure of uncharacterized conserved protein from Methanocaldococcus jannaschii

PDB ID 2ywj

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools