This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2z0m

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:17, 1 November 2023) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2z0m.jpg|left|200px]]
 
-
{{Structure
+
==Crystal structure of hypothetical ATP-dependent RNA helicase from Sulfolobus tokodaii==
-
|PDB= 2z0m |SIZE=350|CAPTION= <scene name='initialview01'>2z0m</scene>, resolution 1.90&Aring;
+
<StructureSection load='2z0m' size='340' side='right'caption='[[2z0m]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND=
+
<table><tr><td colspan='2'>[[2z0m]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Sulfurisphaera_tokodaii Sulfurisphaera tokodaii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Z0M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Z0M FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
|GENE=
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2z0m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2z0m OCA], [https://pdbe.org/2z0m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2z0m RCSB], [https://www.ebi.ac.uk/pdbsum/2z0m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2z0m ProSAT], [https://www.topsan.org/Proteins/RSGI/2z0m TOPSAN]</span></td></tr>
-
}}
+
</table>
-
 
+
== Function ==
-
'''Crystal structure of hypothetical ATP-dependent RNA helicase from Sulfolobus tokodaii'''
+
[https://www.uniprot.org/uniprot/Q96XQ7_SULTO Q96XQ7_SULTO]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
2Z0M is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Sulfolobus_tokodaii Sulfolobus tokodaii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Z0M OCA].
+
<jmolCheckbox>
-
[[Category: Single protein]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z0/2z0m_consurf.spt"</scriptWhenChecked>
-
[[Category: Sulfolobus tokodaii]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Chen, L.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Chrzas, J.]]
+
</jmolCheckbox>
-
[[Category: Fu, Z Q.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2z0m ConSurf].
-
[[Category: Kuramitsu, S.]]
+
<div style="clear:both"></div>
-
[[Category: Kusano, S.]]
+
__TOC__
-
[[Category: Nakagawa, N.]]
+
</StructureSection>
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
[[Category: Large Structures]]
-
[[Category: Shirouzu, M.]]
+
[[Category: Sulfurisphaera tokodaii]]
-
[[Category: Wang, B C.]]
+
[[Category: Chen L]]
-
[[Category: Yokoyama, S.]]
+
[[Category: Chrzas J]]
-
[[Category: atp-binding]]
+
[[Category: Fu Z-Q]]
-
[[Category: helicase]]
+
[[Category: Kuramitsu S]]
-
[[Category: hydrolase]]
+
[[Category: Kusano S]]
-
[[Category: national project on protein structural and functional analyse]]
+
[[Category: Nakagawa N]]
-
[[Category: nppsfa]]
+
[[Category: Shirouzu M]]
-
[[Category: nucleotide-binding]]
+
[[Category: Wang B-C]]
-
[[Category: riken structural genomics/proteomics initiative]]
+
[[Category: Yokoyama S]]
-
[[Category: rna binding protein]]
+
-
[[Category: rsgi]]
+
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:50:52 2008''
+

Current revision

Crystal structure of hypothetical ATP-dependent RNA helicase from Sulfolobus tokodaii

PDB ID 2z0m

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools