5b8i

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(New page: '''Unreleased structure''' The entry 5b8i is ON HOLD Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID), Fox III, D., Dranow, D.M., Lorimer, D.D., Edwards, T.E....)
Current revision (08:26, 27 September 2023) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 5b8i is ON HOLD
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==Crystal structure of Calcineurin A and Calcineurin B in complex with FKBP12 and FK506 from Coccidioides immitis RS==
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<StructureSection load='5b8i' size='340' side='right'caption='[[5b8i]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5b8i]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Coccidioides_immitis_RS Coccidioides immitis RS]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5B8I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5B8I FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=FK5:8-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN'>FK5</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5b8i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5b8i OCA], [https://pdbe.org/5b8i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5b8i RCSB], [https://www.ebi.ac.uk/pdbsum/5b8i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5b8i ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/J3K8M7_COCIM J3K8M7_COCIM]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Calcineurin is important for fungal virulence and a potential antifungal target, but compounds targeting calcineurin, such as FK506, are immunosuppressive. Here we report the crystal structures of calcineurin catalytic (CnA) and regulatory (CnB) subunits complexed with FK506 and the FK506-binding protein (FKBP12) from human fungal pathogens (Aspergillus fumigatus, Candida albicans, Cryptococcus neoformans and Coccidioides immitis). Fungal calcineurin complexes are similar to the mammalian complex, but comparison of fungal and human FKBP12 (hFKBP12) reveals conformational differences in the 40s and 80s loops. NMR analysis, molecular dynamic simulations, and mutations of the A. fumigatus CnA/CnB-FK506-FKBP12-complex identify a Phe88 residue, not conserved in hFKBP12, as critical for binding and inhibition of fungal calcineurin. These differences enable us to develop a less immunosuppressive FK506 analog, APX879, with an acetohydrazine substitution of the C22-carbonyl of FK506. APX879 exhibits reduced immunosuppressive activity and retains broad-spectrum antifungal activity and efficacy in a murine model of invasive fungal infection.
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Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID), Fox III, D., Dranow, D.M., Lorimer, D.D., Edwards, T.E.
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Harnessing calcineurin-FK506-FKBP12 crystal structures from invasive fungal pathogens to develop antifungal agents.,Juvvadi PR, Fox D 3rd, Bobay BG, Hoy MJ, Gobeil SMC, Venters RA, Chang Z, Lin JJ, Averette AF, Cole DC, Barrington BC, Wheaton JD, Ciofani M, Trzoss M, Li X, Lee SC, Chen YL, Mutz M, Spicer LD, Schumacher MA, Heitman J, Steinbach WJ Nat Commun. 2019 Sep 19;10(1):4275. doi: 10.1038/s41467-019-12199-1. PMID:31537789<ref>PMID:31537789</ref>
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Description: Crystal structure of Calcineurin A and Calcineurin B in complex with FKBP12 and FK506 from Coccidioides immitis RS
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Dranow, D.M]]
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<div class="pdbe-citations 5b8i" style="background-color:#fffaf0;"></div>
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[[Category: Edwards, T.E]]
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[[Category: Lorimer, D.D]]
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==See Also==
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[[Category: Seattle Structural Genomics Center For Infectious Disease (Ssgcid), Fox Iii, D]]
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*[[Calcineurin 3D structures|Calcineurin 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Coccidioides immitis RS]]
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[[Category: Large Structures]]
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[[Category: Dranow DM]]
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[[Category: Edwards TE]]
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[[Category: Fox III D]]
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[[Category: Lorimer DD]]

Current revision

Crystal structure of Calcineurin A and Calcineurin B in complex with FKBP12 and FK506 from Coccidioides immitis RS

PDB ID 5b8i

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