2ze5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:57, 13 March 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2ze5.jpg|left|200px]]
 
-
{{Structure
+
==Crystal Structure of adenosine phosphate-isopentenyltransferase==
-
|PDB= 2ze5 |SIZE=350|CAPTION= <scene name='initialview01'>2ze5</scene>, resolution 2.31&Aring;
+
<StructureSection load='2ze5' size='340' side='right'caption='[[2ze5]], [[Resolution|resolution]] 2.31&Aring;' scene=''>
-
|SITE= <scene name='pdbsite=AC1:Cl+Binding+Site+For+Residue+A+301'>AC1</scene> and <scene name='pdbsite=AC2:Amp+Binding+Site+For+Residue+A+401'>AC2</scene>
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene> and <scene name='pdbligand=AMP:ADENOSINE MONOPHOSPHATE'>AMP</scene>
+
<table><tr><td colspan='2'>[[2ze5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZE5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZE5 FirstGlance]. <br>
-
|ACTIVITY= [http://en.wikipedia.org/wiki/Adenylate_dimethylallyltransferase Adenylate dimethylallyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.27 2.5.1.27]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.31&#8491;</td></tr>
-
|GENE= tzs ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=358 Agrobacterium tumefaciens])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
-
}}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ze5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ze5 OCA], [https://pdbe.org/2ze5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ze5 RCSB], [https://www.ebi.ac.uk/pdbsum/2ze5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ze5 ProSAT]</span></td></tr>
-
 
+
</table>
-
'''Crystal Structure of adenosine phosphate-isopentenyltransferase'''
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/IPTZ_AGRFC IPTZ_AGRFC] Transfers dimethylallyl groups to AMP as part of the biosynthesis of cytokinin phytohormones.[REFERENCE:5]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
2ZE5 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZE5 OCA].
+
Check<jmol>
-
[[Category: Adenylate dimethylallyltransferase]]
+
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ze/2ze5_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ze5 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Agrobacterium tumefaciens]]
[[Category: Agrobacterium tumefaciens]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Sakakibara, H.]]
+
[[Category: Sakakibara H]]
-
[[Category: AMP]]
+
-
[[Category: CL]]
+
-
[[Category: crown gall tumor]]
+
-
[[Category: cytokinin biosynthesis]]
+
-
[[Category: plasmid]]
+
-
[[Category: transferase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:53:56 2008''
+

Current revision

Crystal Structure of adenosine phosphate-isopentenyltransferase

PDB ID 2ze5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2ze5"
Personal tools