3b40

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[[Image:3b40.jpg|left|200px]]
 
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{{Structure
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==Crystal structure of the probable dipeptidase PvdM from Pseudomonas aeruginosa==
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|PDB= 3b40 |SIZE=350|CAPTION= <scene name='initialview01'>3b40</scene>, resolution 2.000&Aring;
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<StructureSection load='3b40' size='340' side='right'caption='[[3b40]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene> and <scene name='pdbligand=CA:CALCIUM ION'>CA</scene>
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<table><tr><td colspan='2'>[[3b40]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3B40 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3B40 FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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|GENE= pvdM, PA2393 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=287 Pseudomonas aeruginosa])
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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}}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3b40 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3b40 OCA], [https://pdbe.org/3b40 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3b40 RCSB], [https://www.ebi.ac.uk/pdbsum/3b40 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3b40 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3b40 TOPSAN]</span></td></tr>
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</table>
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'''Crystal structure of the probable dipeptidase PvdM from Pseudomonas aeruginosa'''
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== Function ==
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[https://www.uniprot.org/uniprot/Q5DIQ1_PSEAI Q5DIQ1_PSEAI]
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== Evolutionary Conservation ==
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==About this Structure==
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[[Image:Consurf_key_small.gif|200px|right]]
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3B40 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3B40 OCA].
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/b4/3b40_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3b40 ConSurf].
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<div style="clear:both"></div>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
[[Category: Pseudomonas aeruginosa]]
[[Category: Pseudomonas aeruginosa]]
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[[Category: Single protein]]
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[[Category: Almo SC]]
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[[Category: Almo, S C.]]
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[[Category: Bain KT]]
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[[Category: Bain, K T.]]
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[[Category: Bonanno JB]]
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[[Category: Bonanno, J B.]]
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[[Category: Burley SK]]
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[[Category: Burley, S K.]]
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[[Category: Dickey M]]
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[[Category: Dickey, M.]]
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[[Category: Fong R]]
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[[Category: Fong, R.]]
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[[Category: Mendoza M]]
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[[Category: Mendoza, M.]]
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[[Category: Patskovsky Y]]
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[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
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[[Category: Sauder JM]]
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[[Category: Patskovsky, Y.]]
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[[Category: Smith D]]
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[[Category: Sauder, J M.]]
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[[Category: Wasserman S]]
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[[Category: Smith, D.]]
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[[Category: Wasserman, S.]]
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[[Category: CA]]
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[[Category: CD]]
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[[Category: MG]]
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[[Category: hydrolase]]
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[[Category: new york structural genomix research consortium]]
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[[Category: nysgxrc]]
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[[Category: protein structure initiative]]
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[[Category: psi-2]]
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[[Category: structural genomic]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:55:54 2008''
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Current revision

Crystal structure of the probable dipeptidase PvdM from Pseudomonas aeruginosa

PDB ID 3b40

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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