4zzk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "4zzk" [edit=sysop:move=sysop])
Current revision (11:01, 10 January 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 4zzk is ON HOLD until Paper Publication
+
==Crystal structure of truncated FlgD (monoclinic form) from the human pathogen Helicobacter pylori==
 +
<StructureSection load='4zzk' size='340' side='right'caption='[[4zzk]], [[Resolution|resolution]] 2.75&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[4zzk]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori_G27 Helicobacter pylori G27]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ZZK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4ZZK FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.75&#8491;</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4zzk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4zzk OCA], [https://pdbe.org/4zzk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4zzk RCSB], [https://www.ebi.ac.uk/pdbsum/4zzk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4zzk ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/B5Z7R3_HELPG B5Z7R3_HELPG] Required for flagellar hook formation. May act as a scaffolding protein.[RuleBase:RU362076]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Flagellin component D (FlgD) participates in the assembly of flagella, helical tubular structures that provide motility in non-filamentous bacteria. FlgD guides and controls the polymerization of FlgE that builds the hook, a short curved and hollow cylinder that connects the flagellar basal body spanning the cell envelope to the protruding filament. Crystal structures of truncated forms of Helicobacter pylori FlgD from two different strains in two space groups, I422 and P2, are reported here, at 2.2A and 2.8A resolution, respectively. Analogously to Pseudomonas aeruginosa and Xanthomonas campestris FlgD proteins, crystallization experiments set up for the full length protein resulted in crystals of a truncated form, lacking both N- and C-terminus ends. The crystal structures of the central domain show that the monomer is composed of a tudor and a fibronectin type III domain. The full length HpFlgD contains a long N-terminal signal region, probably partially flexible, a central globular region and a C-terminal segment with a peculiar repetitive pattern of amino acids. The spatial orientation of the two domains in HpFlgD differs from that of the homologous FlgD family members, P. aeruginosa and X. campestris. This difference together with the observation that HpFlgD assembles into tetramers, both in the solution and in the two crystal forms, strongly suggests that significant differences exist in the molecular organization of the flagella in different bacterial species.
-
Authors: Pulic, I., Cendron, L., Salamina, M., Matkovic-Calogovic, D., Zanotti, G.
+
Crystal structure of truncated FlgD from the human pathogen Helicobacter pylori.,Pulic I, Cendron L, Salamina M, Polverino de Laureto P, Matkovic-Calogovic D, Zanotti G J Struct Biol. 2016 Feb 8. pii: S1047-8477(16)30018-1. doi:, 10.1016/j.jsb.2016.02.003. PMID:26868107<ref>PMID:26868107</ref>
-
Description: Crystal structure of truncated FlgD (monoclinic form) from the human pathogen Helicobacter pylori
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
-
[[Category: Pulic, I]]
+
<div class="pdbe-citations 4zzk" style="background-color:#fffaf0;"></div>
-
[[Category: Cendron, L]]
+
== References ==
-
[[Category: Matkovic-Calogovic, D]]
+
<references/>
-
[[Category: Salamina, M]]
+
__TOC__
-
[[Category: Zanotti, G]]
+
</StructureSection>
 +
[[Category: Helicobacter pylori G27]]
 +
[[Category: Large Structures]]
 +
[[Category: Cendron L]]
 +
[[Category: Matkovic-Calogovic D]]
 +
[[Category: Pulic I]]
 +
[[Category: Salamina M]]
 +
[[Category: Zanotti G]]

Current revision

Crystal structure of truncated FlgD (monoclinic form) from the human pathogen Helicobacter pylori

PDB ID 4zzk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools