4zah
From Proteopedia
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==Crystal structure of sugar aminotransferase WecE with External Aldimine VII from Escherichia coli K-12== | ==Crystal structure of sugar aminotransferase WecE with External Aldimine VII from Escherichia coli K-12== | ||
- | <StructureSection load='4zah' size='340' side='right' caption='[[4zah]], [[Resolution|resolution]] 2.24Å' scene=''> | + | <StructureSection load='4zah' size='340' side='right'caption='[[4zah]], [[Resolution|resolution]] 2.24Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[4zah]] is a 8 chain structure. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4wfp 4wfp]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ZAH OCA]. For a <b>guided tour on the structure components</b> use [ | + | <table><tr><td colspan='2'>[[4zah]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4wfp 4wfp]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ZAH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4ZAH FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=T5K:[[(2R,3S,5R)-5-[5-METHYL-2,4-BIS(OXIDANYLIDENE)PYRIMIDIN-1-YL]-3-OXIDANYL-OXOLAN-2-YL]METHOXY-OXIDANYL-PHOSPHORYL]+[(2R,3R,4S,5R,6R)-6-METHYL-5-[(E)-[2-METHYL-3-OXIDANYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL]METHYLIDENEAMINO]-3,4-BIS(OXIDANYL)OXAN-2-YL]+HYDROGEN+PHOSPHATE'>T5K</scene | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.24Å</td></tr> |
- | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=T5K:[[(2R,3S,5R)-5-[5-METHYL-2,4-BIS(OXIDANYLIDENE)PYRIMIDIN-1-YL]-3-OXIDANYL-OXOLAN-2-YL]METHOXY-OXIDANYL-PHOSPHORYL]+[(2R,3R,4S,5R,6R)-6-METHYL-5-[(E)-[2-METHYL-3-OXIDANYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL]METHYLIDENEAMINO]-3,4-BIS(OXIDANYL)OXAN-2-YL]+HYDROGEN+PHOSPHATE'>T5K</scene></td></tr> | |
- | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4zah FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4zah OCA], [https://pdbe.org/4zah PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4zah RCSB], [https://www.ebi.ac.uk/pdbsum/4zah PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4zah ProSAT]</span></td></tr> | |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
== Function == | == Function == | ||
- | [ | + | [https://www.uniprot.org/uniprot/WECE_ECOLI WECE_ECOLI] Catalyzes the synthesis of dTDP-4-amino-4,6-dideoxy-D-galactose (dTDP-Fuc4N) from dTDP-4-keto-6-deoxy-D-glucose (dTDP-D-Glc4O) and L-glutamate.[HAMAP-Rule:MF_02026]<ref>PMID:15271350</ref> |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
+ | <div class="pdbe-citations 4zah" style="background-color:#fffaf0;"></div> | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Escherichia coli K-12]] |
- | [[Category: | + | [[Category: Large Structures]] |
- | [[Category: | + | [[Category: Cao H]] |
- | [[Category: | + | [[Category: Miller MD]] |
- | [[Category: Phillips | + | [[Category: Phillips Jr GN]] |
- | [[Category: Singh | + | [[Category: Singh S]] |
- | [[Category: Thorson | + | [[Category: Thorson JS]] |
- | [[Category: Wang | + | [[Category: Wang F]] |
- | [[Category: Xu | + | [[Category: Xu W]] |
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Current revision
Crystal structure of sugar aminotransferase WecE with External Aldimine VII from Escherichia coli K-12
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Categories: Escherichia coli K-12 | Large Structures | Cao H | Miller MD | Phillips Jr GN | Singh S | Thorson JS | Wang F | Xu W