3bga

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:48, 30 October 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3bga.jpg|left|200px]]
 
-
{{Structure
+
==Crystal structure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482==
-
|PDB= 3bga |SIZE=350|CAPTION= <scene name='initialview01'>3bga</scene>, resolution 2.10&Aring;
+
<StructureSection load='3bga' size='340' side='right'caption='[[3bga]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene> and <scene name='pdbligand=CL:CHLORIDE ION'>CL</scene>
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BGA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BGA FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
|GENE= NP_810539.1, BT_1626 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2 Bacteria])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
}}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bga FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bga OCA], [https://pdbe.org/3bga PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bga RCSB], [https://www.ebi.ac.uk/pdbsum/3bga PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bga ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3bga TOPSAN]</span></td></tr>
 +
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bg/3bga_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bga ConSurf].
 +
<div style="clear:both"></div>
-
'''Crystal structure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482'''
+
==See Also==
-
 
+
*[[Galactosidase 3D structures|Galactosidase 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
3BGA is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacteria Bacteria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BGA OCA].
+
[[Category: Large Structures]]
-
[[Category: Bacteria]]
+
[[Category: Burley SK]]
-
[[Category: Single protein]]
+
[[Category: Kumaran D]]
-
[[Category: Burley, S K.]]
+
[[Category: Swaminathan S]]
-
[[Category: Kumaran, D.]]
+
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
-
[[Category: Swaminathan, S.]]
+
-
[[Category: CL]]
+
-
[[Category: MG]]
+
-
[[Category: NA]]
+
-
[[Category: beta-galactosidase]]
+
-
[[Category: glycosyl hydrolase family 2]]
+
-
[[Category: immunoglobulin-like fold]]
+
-
[[Category: jelly-roll fold]]
+
-
[[Category: new york structural genomix research consortium]]
+
-
[[Category: nysgxrc]]
+
-
[[Category: protein structure initiative ii (psi-ii)]]
+
-
[[Category: structural genomic]]
+
-
[[Category: tim-barrel domain]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:58:40 2008''
+

Current revision

Crystal structure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482

PDB ID 3bga

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3bga"
Personal tools