3bh1

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:29, 21 February 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3bh1.gif|left|200px]]
 
-
{{Structure
+
==Crystal structure of protein DIP2346 from Corynebacterium diphtheriae==
-
|PDB= 3bh1 |SIZE=350|CAPTION= <scene name='initialview01'>3bh1</scene>, resolution 2.51&Aring;
+
<StructureSection load='3bh1' size='340' side='right'caption='[[3bh1]], [[Resolution|resolution]] 2.51&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>
+
<table><tr><td colspan='2'>[[3bh1]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Corynebacterium_diphtheriae_NCTC_13129 Corynebacterium diphtheriae NCTC 13129]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BH1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BH1 FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.51&#8491;</td></tr>
-
|GENE= DIP2346 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=257309 Corynebacterium diphtheriae NCTC 13129])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-
}}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bh1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bh1 OCA], [https://pdbe.org/3bh1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bh1 RCSB], [https://www.ebi.ac.uk/pdbsum/3bh1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bh1 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3bh1 TOPSAN]</span></td></tr>
-
 
+
</table>
-
'''Crystal structure of protein DIP2346 from Corynebacterium diphtheriae'''
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Y2346_CORDI Y2346_CORDI]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
3BH1 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Corynebacterium_diphtheriae_nctc_13129 Corynebacterium diphtheriae nctc 13129]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BH1 OCA].
+
Check<jmol>
-
[[Category: Corynebacterium diphtheriae nctc 13129]]
+
<jmolCheckbox>
-
[[Category: Single protein]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bh/3bh1_consurf.spt"</scriptWhenChecked>
-
[[Category: Almo, S C.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Bonanno, J B.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Burley, S K.]]
+
</jmolCheckbox>
-
[[Category: Gheyi, T.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bh1 ConSurf].
-
[[Category: Gilmore, M.]]
+
<div style="clear:both"></div>
-
[[Category: Groshong, C.]]
+
__TOC__
-
[[Category: Iizuka, M.]]
+
</StructureSection>
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
[[Category: Corynebacterium diphtheriae NCTC 13129]]
-
[[Category: Patskovsky, Y.]]
+
[[Category: Large Structures]]
-
[[Category: Sauder, J M.]]
+
[[Category: Almo SC]]
-
[[Category: Sridhar, V.]]
+
[[Category: Bonanno JB]]
-
[[Category: Wasserman, S R.]]
+
[[Category: Burley SK]]
-
[[Category: GOL]]
+
[[Category: Gheyi T]]
-
[[Category: new york structural genomix research consortium]]
+
[[Category: Gilmore M]]
-
[[Category: nysgxrc]]
+
[[Category: Groshong C]]
-
[[Category: protein structure initiative]]
+
[[Category: Iizuka M]]
-
[[Category: psi-2]]
+
[[Category: Patskovsky Y]]
-
[[Category: structural genomic]]
+
[[Category: Sauder JM]]
-
[[Category: unknown function]]
+
[[Category: Sridhar V]]
-
 
+
[[Category: Wasserman SR]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:58:51 2008''
+

Current revision

Crystal structure of protein DIP2346 from Corynebacterium diphtheriae

PDB ID 3bh1

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools