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3c6c

From Proteopedia

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[[Image:3c6c.jpg|left|200px]]
 
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{{Structure
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==Crystal structure of a putative 3-keto-5-aminohexanoate cleavage enzyme (reut_c6226) from ralstonia eutropha jmp134 at 1.72 A resolution==
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|PDB= 3c6c |SIZE=350|CAPTION= <scene name='initialview01'>3c6c</scene>, resolution 1.720&Aring;
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<StructureSection load='3c6c' size='340' side='right'caption='[[3c6c]], [[Resolution|resolution]] 1.72&Aring;' scene=''>
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|SITE= <scene name='pdbsite=AC1:Ni+Binding+Site+For+Residue+A+298'>AC1</scene>, <scene name='pdbsite=AC2:Act+Binding+Site+For+Residue+A+299'>AC2</scene>, <scene name='pdbsite=AC3:Edo+Binding+Site+For+Residue+A+300'>AC3</scene>, <scene name='pdbsite=AC4:Edo+Binding+Site+For+Residue+A+301'>AC4</scene>, <scene name='pdbsite=AC5:Edo+Binding+Site+For+Residue+A+302'>AC5</scene> and <scene name='pdbsite=AC6:Peg+Binding+Site+For+Residue+A+303'>AC6</scene>
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene> and <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>
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<table><tr><td colspan='2'>[[3c6c]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cupriavidus_pinatubonensis_JMP134 Cupriavidus pinatubonensis JMP134]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C6C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C6C FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
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|GENE= YP_293392.1, Reut_C6226 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=264198 Ralstonia eutropha JMP134])
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c6c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c6c OCA], [https://pdbe.org/3c6c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c6c RCSB], [https://www.ebi.ac.uk/pdbsum/3c6c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c6c ProSAT], [https://www.topsan.org/Proteins/JCSG/3c6c TOPSAN]</span></td></tr>
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}}
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</table>
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== Function ==
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'''Crystal structure of 3-keto-5-aminohexanoate cleavage enzyme (YP_293392.1) from Ralstonia eutropha JMP134 at 1.72 A resolution'''
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[https://www.uniprot.org/uniprot/Q46MU0_CUPPJ Q46MU0_CUPPJ]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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==About this Structure==
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Check<jmol>
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3C6C is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Ralstonia_eutropha_jmp134 Ralstonia eutropha jmp134]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C6C OCA].
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<jmolCheckbox>
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[[Category: Ralstonia eutropha jmp134]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c6/3c6c_consurf.spt"</scriptWhenChecked>
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[[Category: Single protein]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: JCSG, Joint Center for Structural Genomics.]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: ACT]]
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</jmolCheckbox>
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[[Category: EDO]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c6c ConSurf].
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[[Category: NI]]
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<div style="clear:both"></div>
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[[Category: PEG]]
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__TOC__
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[[Category: 3-keto-5-aminohexanoate cleavage enzyme]]
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</StructureSection>
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[[Category: jcsg]]
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[[Category: Cupriavidus pinatubonensis JMP134]]
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[[Category: joint center for structural genomic]]
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[[Category: Large Structures]]
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[[Category: plasmid]]
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[[Category: prokaryotic protein of unknown function (duf849)]]
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[[Category: protein structure initiative]]
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[[Category: psi-2]]
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[[Category: structural genomic]]
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[[Category: unknown function]]
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[[Category: yp_293392 1]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 19:02:45 2008''
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Current revision

Crystal structure of a putative 3-keto-5-aminohexanoate cleavage enzyme (reut_c6226) from ralstonia eutropha jmp134 at 1.72 A resolution

PDB ID 3c6c

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