5br8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:28, 27 September 2023) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 5br8 is ON HOLD
+
==Ambient-temperature crystal structure of 30S ribosomal subunit from Thermus thermophilus in complex with paromomycin==
 +
<StructureSection load='5br8' size='340' side='right'caption='[[5br8]], [[Resolution|resolution]] 3.40&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[5br8]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5BR8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5BR8 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.4&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=0TD:(3S)-3-(METHYLSULFANYL)-L-ASPARTIC+ACID'>0TD</scene>, <scene name='pdbligand=2MG:2N-METHYLGUANOSINE-5-MONOPHOSPHATE'>2MG</scene>, <scene name='pdbligand=4OC:4N,O2-METHYLCYTIDINE-5-MONOPHOSPHATE'>4OC</scene>, <scene name='pdbligand=5MC:5-METHYLCYTIDINE-5-MONOPHOSPHATE'>5MC</scene>, <scene name='pdbligand=G7M:N7-METHYL-GUANOSINE-5-MONOPHOSPHATE'>G7M</scene>, <scene name='pdbligand=M2G:N2-DIMETHYLGUANOSINE-5-MONOPHOSPHATE'>M2G</scene>, <scene name='pdbligand=MA6:6N-DIMETHYLADENOSINE-5-MONOPHOSHATE'>MA6</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PAR:PAROMOMYCIN'>PAR</scene>, <scene name='pdbligand=PSU:PSEUDOURIDINE-5-MONOPHOSPHATE'>PSU</scene>, <scene name='pdbligand=UR3:3-METHYLURIDINE-5-MONOPHOSHATE'>UR3</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5br8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5br8 OCA], [https://pdbe.org/5br8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5br8 RCSB], [https://www.ebi.ac.uk/pdbsum/5br8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5br8 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/RS2_THET8 RS2_THET8] Spans the head-body hinge region of the 30S subunit. Is loosely associated with the 30S subunit.[HAMAP-Rule:MF_00291_B]
-
Authors: Sierra, R.G., Gati, C., Laksmono, H., Dao, E.H., Gul, S., Fuller, F., Kern, J., Chatterjee, R., Ibrahim, M., Brewster, A., Young, I.D., Michels-Clark, T., Aquila, A., Mengning, L., Hunter, M.S., Koglin, J.E., Boutet, S., Junco, E.A., Hayes, B., Bogan, M.J., Hampton, C.Y., Puglisi, E.V., Sauter, N.K., Stan, C.A., Zouni, A., Yano, J., Yachandra, V.K., Soltis, S.M., Puglisi, J.D., DeMirci, H.
+
==See Also==
-
 
+
*[[Ribosomal protein THX 3D structures|Ribosomal protein THX 3D structures]]
-
Description:
+
__TOC__
-
[[Category: Unreleased Structures]]
+
</StructureSection>
-
[[Category: Brewster, A]]
+
[[Category: Large Structures]]
-
[[Category: Ibrahim, M]]
+
[[Category: Thermus thermophilus HB8]]
-
[[Category: Zouni, A]]
+
[[Category: Aquila A]]
-
[[Category: Kern, J]]
+
[[Category: Bogan MJ]]
-
[[Category: Hunter, M.S]]
+
[[Category: Boutet S]]
-
[[Category: Puglisi, J.D]]
+
[[Category: Brewster A]]
-
[[Category: Soltis, S.M]]
+
[[Category: Chatterjee R]]
-
[[Category: Young, I.D]]
+
[[Category: Dao EH]]
-
[[Category: Chatterjee, R]]
+
[[Category: DeMirci H]]
-
[[Category: Mengning, L]]
+
[[Category: Fuller F]]
-
[[Category: Hayes, B]]
+
[[Category: Gati C]]
-
[[Category: Koglin, J.E]]
+
[[Category: Gul S]]
-
[[Category: Fuller, F]]
+
[[Category: Hampton CY]]
-
[[Category: Puglisi, E.V]]
+
[[Category: Hayes B]]
-
[[Category: Gati, C]]
+
[[Category: Hunter MS]]
-
[[Category: Aquila, A]]
+
[[Category: Ibrahim M]]
-
[[Category: Boutet, S]]
+
[[Category: Junco EA]]
-
[[Category: Michels-Clark, T]]
+
[[Category: Kern J]]
-
[[Category: Hampton, C.Y]]
+
[[Category: Koglin JE]]
-
[[Category: Sierra, R.G]]
+
[[Category: Laksmono H]]
-
[[Category: Sauter, N.K]]
+
[[Category: Mengning L]]
-
[[Category: Laksmono, H]]
+
[[Category: Michels-Clark T]]
-
[[Category: Stan, C.A]]
+
[[Category: Puglisi EV]]
-
[[Category: Dao, E.H]]
+
[[Category: Puglisi JD]]
-
[[Category: Yano, J]]
+
[[Category: Sauter NK]]
-
[[Category: Bogan, M.J]]
+
[[Category: Sierra RG]]
-
[[Category: Demirci, H]]
+
[[Category: Soltis SM]]
-
[[Category: Yachandra, V.K]]
+
[[Category: Stan CA]]
-
[[Category: Gul, S]]
+
[[Category: Yachandra VK]]
-
[[Category: Junco, E.A]]
+
[[Category: Yano J]]
 +
[[Category: Young ID]]
 +
[[Category: Zouni A]]

Current revision

Ambient-temperature crystal structure of 30S ribosomal subunit from Thermus thermophilus in complex with paromomycin

PDB ID 5br8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5br8"
Personal tools