3cdl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px {{Structure |PDB= 3cdl |SIZE=350|CAPTION= <scene name='initialview01'>3cdl</scene>, resolution 2.36&Aring; |SITE= |LIGAND= |ACTIVITY= |GENE= aefR, PSPTO3...)
Current revision (07:52, 27 January 2022) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3cdl.jpg|left|200px]]
 
-
{{Structure
+
==Crystal structure of a TetR family transcriptional regulator from Pseudomonas syringae pv. tomato str. DC3000==
-
|PDB= 3cdl |SIZE=350|CAPTION= <scene name='initialview01'>3cdl</scene>, resolution 2.36&Aring;
+
<StructureSection load='3cdl' size='340' side='right'caption='[[3cdl]], [[Resolution|resolution]] 2.36&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND=
+
<table><tr><td colspan='2'>[[3cdl]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Psesm Psesm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CDL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CDL FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
|GENE= aefR, PSPTO3549 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=223283 Pseudomonas syringae pv. tomato str. DC3000])
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">aefR, PSPTO3549 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=223283 PSESM])</td></tr>
-
}}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cdl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cdl OCA], [https://pdbe.org/3cdl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cdl RCSB], [https://www.ebi.ac.uk/pdbsum/3cdl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cdl ProSAT], [https://www.topsan.org/Proteins/MCSG/3cdl TOPSAN]</span></td></tr>
 +
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cd/3cdl_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cdl ConSurf].
 +
<div style="clear:both"></div>
-
'''Crystal structure of a TetR family transcriptional regulator from Pseudomonas syringae pv. tomato str. DC3000'''
+
==See Also==
-
 
+
*[[Tetracycline repressor protein 3D structures|Tetracycline repressor protein 3D structures]]
-
 
+
*[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]]
-
==About this Structure==
+
__TOC__
-
3CDL is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_syringae_pv._tomato_str._dc3000 Pseudomonas syringae pv. tomato str. dc3000]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CDL OCA].
+
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Psesm]]
 +
[[Category: Bigelow, L]]
 +
[[Category: Gu, M]]
 +
[[Category: Joachimiak, A]]
 +
[[Category: Structural genomic]]
 +
[[Category: Tan, K]]
 +
[[Category: Apc88582]]
 +
[[Category: Dna-binding]]
 +
[[Category: Mcsg]]
 +
[[Category: PSI, Protein structure initiative]]
[[Category: Pseudomonas syringae pv. tomato str. dc3000]]
[[Category: Pseudomonas syringae pv. tomato str. dc3000]]
-
[[Category: Single protein]]
+
[[Category: Tetr]]
-
[[Category: Bigelow, L.]]
+
[[Category: Transcription]]
-
[[Category: Gu, M.]]
+
[[Category: Transcription regulation]]
-
[[Category: Joachimiak, A.]]
+
[[Category: Transcription regulator]]
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
-
[[Category: Tan, K.]]
+
-
[[Category: apc88582]]
+
-
[[Category: dna-binding]]
+
-
[[Category: mcsg]]
+
-
[[Category: midwest center for structural genomic]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: pseudomonas syringae pv. tomato str. dc3000]]
+
-
[[Category: psi-2]]
+
-
[[Category: structural genomic]]
+
-
[[Category: tetr]]
+
-
[[Category: transcription]]
+
-
[[Category: transcription regulation]]
+
-
[[Category: transcription regulator]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 19:03:37 2008''
+

Current revision

Crystal structure of a TetR family transcriptional regulator from Pseudomonas syringae pv. tomato str. DC3000

PDB ID 3cdl

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools