5cbv
From Proteopedia
(Difference between revisions)
												
			
			| (6 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | '''Unreleased structure'''  | ||
| - | + | ==Human Cyclophilin D Complexed with Inhibitor==  | |
| + | <StructureSection load='5cbv' size='340' side='right'caption='[[5cbv]], [[Resolution|resolution]] 1.80Å' scene=''>  | ||
| + | == Structural highlights ==  | ||
| + | <table><tr><td colspan='2'>[[5cbv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5CBV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5CBV FirstGlance]. <br>  | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr>  | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=4ZP:ETHYL+N-{[3-(PYRIDIN-3-YL)BENZYL]CARBAMOYL}GLYCINATE'>4ZP</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>  | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5cbv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5cbv OCA], [https://pdbe.org/5cbv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5cbv RCSB], [https://www.ebi.ac.uk/pdbsum/5cbv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5cbv ProSAT]</span></td></tr>  | ||
| + | </table>  | ||
| + | == Function ==  | ||
| + | [https://www.uniprot.org/uniprot/PPIF_HUMAN PPIF_HUMAN] PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Involved in regulation of the mitochondrial permeability transition pore (mPTP). It is proposed that its association with the mPTP is masking a binding site for inhibiting inorganic phosphate (Pi) and promotes the open probablity of the mPTP leading to apoptosis or necrosis; the requirement of the PPIase activity for this function is debated. In cooperation with mitochondrial TP53 is involved in activating oxidative stress-induced necrosis. Involved in modulation of mitochondrial membrane F(1)F(0) ATP synthase activity and regulation of mitochondrial matrix adenine nucleotide levels. Has anti-apoptotic activity independently of mPTP and in cooperation with BCL2 inhibits cytochrome c-dependent apoptosis.<ref>PMID:19228691</ref> <ref>PMID:22726440</ref>   | ||
| - | + | ==See Also==  | |
| - | + | *[[Cyclophilin 3D structures|Cyclophilin 3D structures]]  | |
| - | + | == References ==  | |
| - | [[Category:   | + | <references/>  | 
| - | [[Category:   | + | __TOC__  | 
| - | [[Category:   | + | </StructureSection>  | 
| - | [[Category:   | + | [[Category: Homo sapiens]]  | 
| - | [[Category:   | + | [[Category: Large Structures]]  | 
| - | [[Category:   | + | [[Category: Awais M]]  | 
| - | [[Category:   | + | [[Category: Berry N]]  | 
| - | [[Category:   | + | [[Category: Gibson RP]]  | 
| - | [[Category:   | + | [[Category: Javed A]]  | 
| - | [[Category:   | + | [[Category: Kershaw N]]  | 
| - | [[Category:   | + | [[Category: Latawiec D]]  | 
| - | [[Category:   | + | [[Category: Lian LY]]  | 
| - | [[Category:   | + | [[Category: O'Neill P]]  | 
| + | [[Category: Pandalaneni S]]  | ||
| + | [[Category: Shore E]]  | ||
| + | [[Category: Sutton R]]  | ||
| + | [[Category: Wen L]]  | ||
Current revision
Human Cyclophilin D Complexed with Inhibitor
  | |||||||||||
Categories: Homo sapiens | Large Structures | Awais M | Berry N | Gibson RP | Javed A | Kershaw N | Latawiec D | Lian LY | O'Neill P | Pandalaneni S | Shore E | Sutton R | Wen L
