This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
4mu3
From Proteopedia
(Difference between revisions)
| (3 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| + | |||
==The form A structure of an E21Q catalytic mutant of A. thaliana IGPD2 in complex with Mn2+ and a mixture of its substrate, 2R3S-IGP, and an inhibitor, 2S3S-IGP, to 1.12 A resolution== | ==The form A structure of an E21Q catalytic mutant of A. thaliana IGPD2 in complex with Mn2+ and a mixture of its substrate, 2R3S-IGP, and an inhibitor, 2S3S-IGP, to 1.12 A resolution== | ||
| - | <StructureSection load='4mu3' size='340' side='right' caption='[[4mu3]], [[Resolution|resolution]] 1.12Å' scene=''> | + | <StructureSection load='4mu3' size='340' side='right'caption='[[4mu3]], [[Resolution|resolution]] 1.12Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[4mu3]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MU3 OCA]. For a <b>guided tour on the structure components</b> use [ | + | <table><tr><td colspan='2'>[[4mu3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MU3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4MU3 FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=IG2:(2S,3S)-2,3-DIHYDROXY-3-(1H-IMIDAZOL-5-YL)PROPYL+DIHYDROGEN+PHOSPHATE'>IG2</scene>, <scene name='pdbligand=IYP:(2R,3S)-2,3-DIHYDROXY-3-(1H-IMIDAZOL-5-YL)PROPYL+DIHYDROGEN+PHOSPHATE'>IYP</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.12Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=IG2:(2S,3S)-2,3-DIHYDROXY-3-(1H-IMIDAZOL-5-YL)PROPYL+DIHYDROGEN+PHOSPHATE'>IG2</scene>, <scene name='pdbligand=IYP:(2R,3S)-2,3-DIHYDROXY-3-(1H-IMIDAZOL-5-YL)PROPYL+DIHYDROGEN+PHOSPHATE'>IYP</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4mu3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4mu3 OCA], [https://pdbe.org/4mu3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4mu3 RCSB], [https://www.ebi.ac.uk/pdbsum/4mu3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4mu3 ProSAT]</span></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/HIS5B_ARATH HIS5B_ARATH] | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 16: | Line 18: | ||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
| + | <div class="pdbe-citations 4mu3" style="background-color:#fffaf0;"></div> | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Arabidopsis thaliana]] |
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Baker PJ]] |
| - | [[Category: | + | [[Category: Bisson C]] |
| - | [[Category: | + | [[Category: Britton KL]] |
| - | [[Category: | + | [[Category: Rice DW]] |
| - | [[Category: | + | [[Category: Sedelnikova SE]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
The form A structure of an E21Q catalytic mutant of A. thaliana IGPD2 in complex with Mn2+ and a mixture of its substrate, 2R3S-IGP, and an inhibitor, 2S3S-IGP, to 1.12 A resolution
| |||||||||||
