5a8b

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'''Unreleased structure'''
 
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The entry 5a8b is ON HOLD
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==Structure of a parallel dimer of the aureochrome 1a LOV domain from Phaeodactylum tricornutum==
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<StructureSection load='5a8b' size='340' side='right'caption='[[5a8b]], [[Resolution|resolution]] 2.79&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5a8b]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Phaeodactylum_tricornutum Phaeodactylum tricornutum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5A8B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5A8B FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.791&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5a8b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5a8b OCA], [https://pdbe.org/5a8b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5a8b RCSB], [https://www.ebi.ac.uk/pdbsum/5a8b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5a8b ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A0A140UHJ0_PHATR A0A140UHJ0_PHATR]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Light-oxygen-voltage (LOV) domains absorb blue light for mediating various biological responses in all three domains of life. Aureochromes from stramenopile algae represent a subfamily of photoreceptors that differs by its inversed topology with a C-terminal LOV sensor and an N-terminal effector (basic region leucine zipper, bZIP) domain. We crystallized the LOV domain including its flanking helices, A'alpha and Jalpha, of aureochrome 1a from Phaeodactylum tricornutum in the dark state and solved the structure at 2.8 A resolution. Both flanking helices contribute to the interface of the native-like dimer. Small-angle X-ray scattering shows light-induced conformational changes limited to the dimeric envelope as well as increased flexibility in the lit state for the flanking helices. These rearrangements are considered to be crucial for the formation of the light-activated dimer. Finally, the LOV domain of the class 2 aureochrome PtAUREO2 was shown to lack a chromophore because of steric hindrance caused by M301.
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Authors: Banerjee, A., Herman, E., Kottke, T., Essen, L.O.
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Structure of a Native-like Aureochrome 1a LOV Domain Dimer from Phaeodactylum tricornutum.,Banerjee A, Herman E, Kottke T, Essen LO Structure. 2016 Jan 5;24(1):171-8. doi: 10.1016/j.str.2015.10.022. Epub 2015 Dec , 10. PMID:26688213<ref>PMID:26688213</ref>
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Description: Structure of a parallel dimer of the aureochrome 1a LOV domain from Phaeodactylum tricornutum
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Kottke, T]]
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<div class="pdbe-citations 5a8b" style="background-color:#fffaf0;"></div>
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[[Category: Essen, L.O]]
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== References ==
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[[Category: Herman, E]]
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<references/>
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[[Category: Banerjee, A]]
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Phaeodactylum tricornutum]]
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[[Category: Banerjee A]]
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[[Category: Essen LO]]
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[[Category: Herman E]]
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[[Category: Kottke T]]

Current revision

Structure of a parallel dimer of the aureochrome 1a LOV domain from Phaeodactylum tricornutum

PDB ID 5a8b

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