2uvy

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:30, 6 November 2024) (edit) (undo)
 
(20 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2uvy.gif|left|200px]]<br />
 
-
<applet load="2uvy" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2uvy, resolution 1.95&Aring;" />
 
-
'''STRUCTURE OF PKA-PKB CHIMERA COMPLEXED WITH METHYL-(4-(9H-PURIN-6-YL)-BENZYL)-AMINE'''<br />
 
-
==About this Structure==
+
==Structure of PKA-PKB chimera complexed with methyl-(4-(9H-purin-6-yl)- benzyl)-amine==
-
2UVY is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus] with GVI as [http://en.wikipedia.org/wiki/ligand ligand]. Structure known Active Site: AC1. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2UVY OCA].
+
<StructureSection load='2uvy' size='340' side='right'caption='[[2uvy]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
-
[[Category: Bos taurus]]
+
== Structural highlights ==
-
[[Category: Protein complex]]
+
<table><tr><td colspan='2'>[[2uvy]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus] and [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2UVY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2UVY FirstGlance]. <br>
-
[[Category: Aherne, G.W.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-
[[Category: Boyle, R.G.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GVI:N-METHYL-1-[4-(9H-PURIN-6-YL)PHENYL]METHANAMINE'>GVI</scene>, <scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene>, <scene name='pdbligand=TPO:PHOSPHOTHREONINE'>TPO</scene></td></tr>
-
[[Category: Collins, I.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2uvy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2uvy OCA], [https://pdbe.org/2uvy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2uvy RCSB], [https://www.ebi.ac.uk/pdbsum/2uvy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2uvy ProSAT]</span></td></tr>
-
[[Category: Davies, T.G.]]
+
</table>
-
[[Category: Donald, A.]]
+
== Function ==
-
[[Category: Garrett, M.D.]]
+
[https://www.uniprot.org/uniprot/IPKA_HUMAN IPKA_HUMAN] Extremely potent competitive inhibitor of cAMP-dependent protein kinase activity, this protein interacts with the catalytic subunit of the enzyme after the cAMP-induced dissociation of its regulatory chains.
-
[[Category: Hunter, L.J.]]
+
== Evolutionary Conservation ==
-
[[Category: Mchardy, T.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Rowlands, M.G.]]
+
Check<jmol>
-
[[Category: GVI]]
+
<jmolCheckbox>
-
[[Category: atp-binding]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/uv/2uvy_consurf.spt"</scriptWhenChecked>
-
[[Category: camp]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: kinase]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: lipoprotein]]
+
</jmolCheckbox>
-
[[Category: myristate]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2uvy ConSurf].
-
[[Category: nuclear protein]]
+
<div style="clear:both"></div>
-
[[Category: nucleotide-binding]]
+
<div style="background-color:#fffaf0;">
-
[[Category: phosphorylation]]
+
== Publication Abstract from PubMed ==
-
[[Category: protein kinase inhibitor]]
+
6-phenylpurines were identified as novel, ATP-competitive inhibitors of protein kinase B (PKB/Akt) from a fragment-based screen and were rapidly progressed to potent compounds using iterative protein-ligand crystallography with a PKA-PKB chimeric protein. An elaborated lead compound showed cell growth inhibition and effects on cellular signaling pathways characteristic of PKB inhibition.
-
[[Category: serine/threonine-protein kinase]]
+
-
[[Category: transferase]]
+
-
[[Category: transferase/inhibitor complex]]
+
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Mon Nov 5 14:30:24 2007''
+
Rapid evolution of 6-phenylpurine inhibitors of protein kinase B through structure-based design.,Donald A, McHardy T, Rowlands MG, Hunter LJ, Davies TG, Berdini V, Boyle RG, Aherne GW, Garrett MD, Collins I J Med Chem. 2007 May 17;50(10):2289-92. Epub 2007 Apr 24. PMID:17451235<ref>PMID:17451235</ref>
 +
 
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 2uvy" style="background-color:#fffaf0;"></div>
 +
 
 +
==See Also==
 +
*[[CAMP-dependent protein kinase 3D structures|CAMP-dependent protein kinase 3D structures]]
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Bos taurus]]
 +
[[Category: Homo sapiens]]
 +
[[Category: Large Structures]]
 +
[[Category: Aherne GW]]
 +
[[Category: Boyle RG]]
 +
[[Category: Collins I]]
 +
[[Category: Davies TG]]
 +
[[Category: Donald A]]
 +
[[Category: Garrett MD]]
 +
[[Category: Hunter LJ]]
 +
[[Category: McHardy T]]
 +
[[Category: Rowlands MG]]

Current revision

Structure of PKA-PKB chimera complexed with methyl-(4-(9H-purin-6-yl)- benzyl)-amine

PDB ID 2uvy

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools