5d21

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(New page: '''Unreleased structure''' The entry 5d21 is ON HOLD until Paper Publication Authors: Bergmann, M., Michaud, G., Visini, R., Jin, X., Stocker, A., Darbre, T., Reymond, J.-L. Descriptio...)
Current revision (11:24, 10 January 2024) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 5d21 is ON HOLD until Paper Publication
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==Multivalency Effects in Glycopeptide Dendrimer Inhibitors of Pseudomonas aeruginosa Biofilms Targeting Lectin LecA==
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<StructureSection load='5d21' size='340' side='right'caption='[[5d21]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5d21]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5D21 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5D21 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=56N:PHENYL+BETA-D-GALACTOPYRANOSIDE'>56N</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5d21 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5d21 OCA], [https://pdbe.org/5d21 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5d21 RCSB], [https://www.ebi.ac.uk/pdbsum/5d21 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5d21 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/PA1L_PSEAE PA1L_PSEAE] D-galactose specific lectin. Binds in decreasing order of affinity: melibiose, methyl-alpha-D-galactoside, D-galactose, methyl-beta-D-galactoside, N-acetyl-D-galactosamine. Similar to plant lectins in its selective (carbohydrate-specific) hemagglutinating activity.
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The galactose specific lectin LecA partly mediates the formation of antibiotic resistant biofilms by Pseudomonas aeruginosa, an opportunistic pathogen causing lethal airways infections in immunocompromised and cystic fibrosis patients, suggesting that preventing LecA binding to natural saccharides might provide new opportunities for treatment. Here 8-fold (G3) and 16-fold (G4) galactosylated analogs of , a tetravalent G2 glycopeptide dendrimer LecA ligand and P. aeruginosa biofilm inhibitor, were obtained by convergent chloroacetyl thioether (ClAc) ligation between 4-fold or 8-fold chloroacetylated dendrimer cores and digalactosylated dendritic arms. Hemagglutination inhibition, isothermal titration calorimetry and biofilm inhibition assays showed that G3 dendrimers bind LecA slightly better than their parent G2 dendrimers and induce complete biofilm inhibition and dispersal of P. aeruginosa biofilms, while G4 dendrimers show reduced binding and no biofilm inhibition. A binding model accounting for the observed saturation of glycopeptide dendrimer galactosyl groups and LecA binding sites is proposed based on the crystal structure of a G3 dendrimer LecA complex.
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Authors: Bergmann, M., Michaud, G., Visini, R., Jin, X., Stocker, A., Darbre, T., Reymond, J.-L.
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Multivalency effects on Pseudomonas aeruginosa biofilm inhibition and dispersal by glycopeptide dendrimers targeting lectin LecA.,Bergmann M, Michaud G, Visini R, Jin X, Gillon E, Stocker A, Imberty A, Darbre T, Reymond JL Org Biomol Chem. 2015 Sep 29. PMID:26416170<ref>PMID:26416170</ref>
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Description: Multivalency Effects in Glycopeptide Dendrimer Inhibitors of Pseudomonas aeruginosa Biofilms Targeting Lectin LecA
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Michaud, G]]
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<div class="pdbe-citations 5d21" style="background-color:#fffaf0;"></div>
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[[Category: Bergmann, M]]
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== References ==
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[[Category: Visini, R]]
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<references/>
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[[Category: Reymond, J.-L]]
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__TOC__
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[[Category: Darbre, T]]
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</StructureSection>
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[[Category: Stocker, A]]
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[[Category: Large Structures]]
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[[Category: Jin, X]]
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[[Category: Pseudomonas aeruginosa]]
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[[Category: Bergmann M]]
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[[Category: Darbre T]]
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[[Category: Jin X]]
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[[Category: Michaud G]]
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[[Category: Reymond J-L]]
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[[Category: Stocker A]]
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[[Category: Visini R]]

Current revision

Multivalency Effects in Glycopeptide Dendrimer Inhibitors of Pseudomonas aeruginosa Biofilms Targeting Lectin LecA

PDB ID 5d21

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