1e5f

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:53, 13 December 2023) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1e5f.gif|left|200px]]
 
-
{{Structure
+
==METHIONINE GAMMA-LYASE (MGL) FROM TRICHOMONAS VAGINALIS==
-
|PDB= 1e5f |SIZE=350|CAPTION= <scene name='initialview01'>1e5f</scene>, resolution 2.18&Aring;
+
<StructureSection load='1e5f' size='340' side='right'caption='[[1e5f]], [[Resolution|resolution]] 2.18&Aring;' scene=''>
-
|SITE= <scene name='pdbsite=PLA:Plp+Binding+Site+Chain+A'>PLA</scene> and <scene name='pdbsite=PLB:Plp+Binding+Site+Chain+B'>PLB</scene>
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5&#39;-PHOSPHATE'>PLP</scene> and <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>
+
<table><tr><td colspan='2'>[[1e5f]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Trichomonas_vaginalis_G3 Trichomonas vaginalis G3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E5F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1E5F FirstGlance]. <br>
-
|ACTIVITY= [http://en.wikipedia.org/wiki/Methionine_gamma-lyase Methionine gamma-lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.4.1.11 4.4.1.11]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.18&#8491;</td></tr>
-
|GENE= MGL1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5722 Trichomonas vaginalis])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
}}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1e5f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e5f OCA], [https://pdbe.org/1e5f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1e5f RCSB], [https://www.ebi.ac.uk/pdbsum/1e5f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1e5f ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/O15564_TRIVA O15564_TRIVA]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e5/1e5f_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1e5f ConSurf].
 +
<div style="clear:both"></div>
-
'''METHIONINE GAMMA-LYASE (MGL) FROM TRICHOMONAS VAGINALIS'''
+
==See Also==
-
 
+
*[[Methionine gamma-lyase 3D structures|Methionine gamma-lyase 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
1E5F is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Trichomonas_vaginalis Trichomonas vaginalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E5F OCA].
+
[[Category: Large Structures]]
-
[[Category: Methionine gamma-lyase]]
+
[[Category: Trichomonas vaginalis G3]]
-
[[Category: Single protein]]
+
[[Category: Coombs GH]]
-
[[Category: Trichomonas vaginalis]]
+
[[Category: Goodall G]]
-
[[Category: Coombs, G H.]]
+
[[Category: Lapthorn AJ]]
-
[[Category: Goodall, G.]]
+
[[Category: Mottram JC]]
-
[[Category: Lapthorn, A J.]]
+
-
[[Category: Mottram, J C.]]
+
-
[[Category: GOL]]
+
-
[[Category: PLP]]
+
-
[[Category: SO4]]
+
-
[[Category: c-s gamma lyase]]
+
-
[[Category: plp-dependent enzyme]]
+
-
[[Category: trichomonas vaginali]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 23 11:36:28 2008''
+

Current revision

METHIONINE GAMMA-LYASE (MGL) FROM TRICHOMONAS VAGINALIS

PDB ID 1e5f

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1e5f"
Personal tools