4r5z

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==Crystal structure of Rv3772 encoded aminotransferase==
==Crystal structure of Rv3772 encoded aminotransferase==
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<StructureSection load='4r5z' size='340' side='right' caption='[[4r5z]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
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<StructureSection load='4r5z' size='340' side='right'caption='[[4r5z]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[4r5z]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4R5Z OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4R5Z FirstGlance]. <br>
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<table><tr><td colspan='2'>[[4r5z]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis_H37Rv Mycobacterium tuberculosis H37Rv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4R5Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4R5Z FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PMP:4-DEOXY-4-AMINOPYRIDOXAL-5-PHOSPHATE'>PMP</scene>, <scene name='pdbligand=SIN:SUCCINIC+ACID'>SIN</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4r5z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4r5z OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4r5z RCSB], [http://www.ebi.ac.uk/pdbsum/4r5z PDBsum]</span></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PMP:4-DEOXY-4-AMINOPYRIDOXAL-5-PHOSPHATE'>PMP</scene>, <scene name='pdbligand=SIN:SUCCINIC+ACID'>SIN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4r5z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4r5z OCA], [https://pdbe.org/4r5z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4r5z RCSB], [https://www.ebi.ac.uk/pdbsum/4r5z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4r5z ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/PATR_MYCTU PATR_MYCTU] May catalyze the transamination reaction in phenylalanine biosynthesis.[HAMAP-Rule:MF_01513]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Aminotransferases of subfamily Ibeta, which include histidinol phosphate aminotransferases (HspATs) and aromatic amino acid aminotransferases (ArATs), are structurally similar but possess distinct substrate specificities. This study, encompassing structural and biochemical characterisation of HspAT and ArAT from Mycobacterium tuberculosis demonstrates that the residues lining the substrate binding pocket and N-terminal lid are the primary determinants of their substrate specificities. In mHspAT, hydrophilic residues in the substrate binding pocket and N-terminal lid allow the entry and binding of its preferential substrate, Hsp. On the other hand, the hydrophobic nature of both the substrate binding pocket and the N-terminal lid of mArAT is responsible for the discrimination of a polar substrate such as Hsp, while facilitating the binding of Phe and other aromatic residues such as Tyr and Trp. In addition, the present study delineates the ligand induced conformational rearrangements, providing insights into the plasticity of aminotransferases. Furthermore, the study also demonstrates that the adventitiously bound ligand 2-(N-morpholino)ethanesulfonic acid (MES) is indeed a specific inhibitor of HspAT. These results suggest that previously untapped morpholine-ring scaffold compounds could be explored for the design of new anti-TB agents.
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Crystal structures of Mycobacterium tuberculosis HspAT and ArAT reveal structural basis of their distinct substrate specificities.,Nasir N, Anant A, Vyas R, Biswal BK Sci Rep. 2016 Jan 7;6:18880. doi: 10.1038/srep18880. PMID:26738801<ref>PMID:26738801</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 4r5z" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Anant, A]]
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[[Category: Large Structures]]
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[[Category: Biswal, B K]]
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[[Category: Mycobacterium tuberculosis H37Rv]]
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[[Category: Nasir, N]]
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[[Category: Anant A]]
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[[Category: Vyas, R]]
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[[Category: Biswal BK]]
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[[Category: Aminotransferase]]
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[[Category: Nasir N]]
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[[Category: Transferase]]
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[[Category: Vyas R]]

Current revision

Crystal structure of Rv3772 encoded aminotransferase

PDB ID 4r5z

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