5a6p

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==Heavy metal associated domain of NLR-type immune receptor Pikp1 from rice (Oryza sativa)==
==Heavy metal associated domain of NLR-type immune receptor Pikp1 from rice (Oryza sativa)==
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<StructureSection load='5a6p' size='340' side='right' caption='[[5a6p]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
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<StructureSection load='5a6p' size='340' side='right'caption='[[5a6p]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5a6p]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5A6P OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5A6P FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5a6p]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Oryza_sativa Oryza sativa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5A6P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5A6P FirstGlance]. <br>
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</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5a6w|5a6w]]</td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5a6p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5a6p OCA], [http://www.rcsb.org/pdb/explore.do?structureId=5a6p RCSB], [http://www.ebi.ac.uk/pdbsum/5a6p PDBsum]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5a6p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5a6p OCA], [https://pdbe.org/5a6p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5a6p RCSB], [https://www.ebi.ac.uk/pdbsum/5a6p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5a6p ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/E9KPB5_ORYSJ E9KPB5_ORYSJ]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Plants have evolved intracellular immune receptors to detect pathogen proteins known as effectors. How these immune receptors detect effectors remains poorly understood. Here we describe the structural basis for direct recognition of AVR-Pik, an effector from the rice blast pathogen, by the rice intracellular NLR immune receptor Pik. AVR-PikD binds a dimer of the Pikp-1 HMA integrated domain with nanomolar affinity. The crystal structure of the Pikp-HMA/AVR-PikD complex enabled design of mutations to alter protein interaction in yeast and in vitro, and perturb effector-mediated response both in a rice cultivar containing Pikp and upon expression of AVR-PikD and Pikp in the model plant Nicotiana benthamiana. These data reveal the molecular details of a recognition event, mediated by a novel integrated domain in an NLR, which initiates a plant immune response and resistance to rice blast disease. Such studies underpin novel opportunities for engineering disease resistance to plant pathogens in staple food crops.
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Structural basis of pathogen recognition by an integrated HMA domain in a plant NLR immune receptor.,Maqbool A, Saitoh H, Franceschetti M, Stevenson C, Uemura A, Kanzaki H, Kamoun S, Terauchi R, Banfield MJ Elife. 2015 Aug 25;4. doi: 10.7554/eLife.08709. PMID:26304198<ref>PMID:26304198</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 5a6p" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Banfield, M J]]
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[[Category: Large Structures]]
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[[Category: Franceschetti, M]]
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[[Category: Oryza sativa]]
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[[Category: Kamoun, S]]
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[[Category: Banfield MJ]]
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[[Category: Kanzaki, H]]
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[[Category: Franceschetti M]]
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[[Category: Maqbool, A]]
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[[Category: Kamoun S]]
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[[Category: Saitoh, H]]
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[[Category: Kanzaki H]]
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[[Category: Stevenson, C E]]
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[[Category: Maqbool A]]
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[[Category: Terauchi, R]]
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[[Category: Saitoh H]]
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[[Category: Uemura, A]]
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[[Category: Stevenson CE]]
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[[Category: Heavy metal associated domain]]
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[[Category: Terauchi R]]
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[[Category: Immune system]]
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[[Category: Uemura A]]
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[[Category: Nlr immune receptor]]
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Current revision

Heavy metal associated domain of NLR-type immune receptor Pikp1 from rice (Oryza sativa)

PDB ID 5a6p

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