4rfl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (17:49, 20 September 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of G1PDH with NADPH from Methanocaldococcus jannaschii==
==Crystal structure of G1PDH with NADPH from Methanocaldococcus jannaschii==
-
<StructureSection load='4rfl' size='340' side='right' caption='[[4rfl]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
+
<StructureSection load='4rfl' size='340' side='right'caption='[[4rfl]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4rfl]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RFL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4RFL FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4rfl]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii_DSM_2661 Methanocaldococcus jannaschii DSM 2661]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RFL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4RFL FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NDP:NADPH+DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NDP</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/sn-glycerol-1-phosphate_dehydrogenase sn-glycerol-1-phosphate dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.261 1.1.1.261] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NDP:NADPH+DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NDP</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4rfl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rfl OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4rfl RCSB], [http://www.ebi.ac.uk/pdbsum/4rfl PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4rfl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rfl OCA], [https://pdbe.org/4rfl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4rfl RCSB], [https://www.ebi.ac.uk/pdbsum/4rfl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4rfl ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/G1PDH_METJA G1PDH_METJA]] Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1-phosphate (G1P). The G1P thus generated is used as the glycerophosphate backbone of phospholipids in the cellular membranes of Archaea.
+
[https://www.uniprot.org/uniprot/G1PDH_METJA G1PDH_METJA] Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1-phosphate (G1P). The G1P thus generated is used as the glycerophosphate backbone of phospholipids in the cellular membranes of Archaea.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 17: Line 18:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 4rfl" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Sn-glycerol-1-phosphate dehydrogenase]]
+
[[Category: Large Structures]]
-
[[Category: Carbone, V]]
+
[[Category: Methanocaldococcus jannaschii DSM 2661]]
-
[[Category: Ronimus, R S]]
+
[[Category: Carbone V]]
-
[[Category: Schofield, L R]]
+
[[Category: Ronimus RS]]
-
[[Category: Sutherland-Smith, A J]]
+
[[Category: Schofield LR]]
-
[[Category: Dehydrogenase]]
+
[[Category: Sutherland-Smith AJ]]
-
[[Category: Oxidoreductase]]
+
-
[[Category: Rossman fold metal ion binding]]
+

Current revision

Crystal structure of G1PDH with NADPH from Methanocaldococcus jannaschii

PDB ID 4rfl

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4rfl"
Personal tools