We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.

5d5g

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (16:14, 8 November 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Structure of colocasia esculenta agglutinin==
==Structure of colocasia esculenta agglutinin==
-
<StructureSection load='5d5g' size='340' side='right' caption='[[5d5g]], [[Resolution|resolution]] 1.74&Aring;' scene=''>
+
<StructureSection load='5d5g' size='340' side='right'caption='[[5d5g]], [[Resolution|resolution]] 1.74&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5d5g]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Colocasia_esculenta Colocasia esculenta]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5D5G OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5D5G FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5d5g]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Colocasia_esculenta Colocasia esculenta]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5D5G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5D5G FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.74&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5d5g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5d5g OCA], [http://www.rcsb.org/pdb/explore.do?structureId=5d5g RCSB], [http://www.ebi.ac.uk/pdbsum/5d5g PDBsum]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5d5g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5d5g OCA], [https://pdbe.org/5d5g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5d5g RCSB], [https://www.ebi.ac.uk/pdbsum/5d5g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5d5g ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CEA_COLES CEA_COLES] Mannose-specific lectin (Ref.1). Shows agglutinating activity towards erythrocytes from rabbit (Ref.1). Has insecticidal activity against cotton aphids and other hemipteran insects (Ref.1).[UniProtKB:A5HMM7]
 +
 +
==See Also==
 +
*[[Agglutinin 3D structures|Agglutinin 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Colocasia esculenta]]
[[Category: Colocasia esculenta]]
-
[[Category: Biswas, H]]
+
[[Category: Large Structures]]
-
[[Category: Chattopadhyaya, R]]
+
[[Category: Biswas H]]
-
[[Category: Agglutinin]]
+
[[Category: Chattopadhyaya R]]
-
[[Category: Beta prism ii]]
+
-
[[Category: Carbohydrate binding]]
+
-
[[Category: Lectin]]
+
-
[[Category: Sugar binding protein]]
+

Current revision

Structure of colocasia esculenta agglutinin

PDB ID 5d5g

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools