1j1i

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:14, 25 October 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of a His-tagged Serine Hydrolase Involved in the Carbazole Degradation (CarC enzyme)==
==Crystal structure of a His-tagged Serine Hydrolase Involved in the Carbazole Degradation (CarC enzyme)==
-
<StructureSection load='1j1i' size='340' side='right' caption='[[1j1i]], [[Resolution|resolution]] 1.86&Aring;' scene=''>
+
<StructureSection load='1j1i' size='340' side='right'caption='[[1j1i]], [[Resolution|resolution]] 1.86&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1j1i]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Janthinobacterium Janthinobacterium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J1I OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1J1I FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1j1i]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Janthinobacterium Janthinobacterium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J1I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1J1I FirstGlance]. <br>
-
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CarC ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=29580 Janthinobacterium])</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.86&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/2,6-dioxo-6-phenylhexa-3-enoate_hydrolase 2,6-dioxo-6-phenylhexa-3-enoate hydrolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.7.1.8 3.7.1.8] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1j1i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j1i OCA], [https://pdbe.org/1j1i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1j1i RCSB], [https://www.ebi.ac.uk/pdbsum/1j1i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1j1i ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1j1i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j1i OCA], [http://pdbe.org/1j1i PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1j1i RCSB], [http://www.ebi.ac.uk/pdbsum/1j1i PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q84II3_JANS3 Q84II3_JANS3]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j1/1j1i_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j1/1j1i_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1j1i ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 30: Line 32:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: 2,6-dioxo-6-phenylhexa-3-enoate hydrolase]]
 
[[Category: Janthinobacterium]]
[[Category: Janthinobacterium]]
-
[[Category: Ayabe, Y]]
+
[[Category: Large Structures]]
-
[[Category: Fushinobu, S]]
+
[[Category: Ayabe Y]]
-
[[Category: Habe, H]]
+
[[Category: Fushinobu S]]
-
[[Category: Morii, K]]
+
[[Category: Habe H]]
-
[[Category: Nam, J W]]
+
[[Category: Morii K]]
-
[[Category: Nojiri, H]]
+
[[Category: Nam JW]]
-
[[Category: Omori, T]]
+
[[Category: Nojiri H]]
-
[[Category: Wakagi, T]]
+
[[Category: Omori T]]
-
[[Category: Yamane, H]]
+
[[Category: Wakagi T]]
-
[[Category: Yoshida, T]]
+
[[Category: Yamane H]]
-
[[Category: Alpha/beta-hydrolase]]
+
[[Category: Yoshida T]]
-
[[Category: Aromatic compound]]
+
-
[[Category: Beta-ketolase]]
+
-
[[Category: Carbazole degradation]]
+
-
[[Category: Dibenzofuran]]
+
-
[[Category: Dioxin]]
+
-
[[Category: Histidine tagged protein]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Meta cleavage product hydrolase]]
+

Current revision

Crystal structure of a His-tagged Serine Hydrolase Involved in the Carbazole Degradation (CarC enzyme)

PDB ID 1j1i

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1j1i"
Personal tools