This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2iqi
From Proteopedia
(Difference between revisions)
| (3 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| + | |||
==Crystal structure of protein XCC0632 from Xanthomonas campestris, Pfam DUF330== | ==Crystal structure of protein XCC0632 from Xanthomonas campestris, Pfam DUF330== | ||
| - | <StructureSection load='2iqi' size='340' side='right' caption='[[2iqi]], [[Resolution|resolution]] 2.70Å' scene=''> | + | <StructureSection load='2iqi' size='340' side='right'caption='[[2iqi]], [[Resolution|resolution]] 2.70Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2iqi]] is a 8 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2iqi]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Xanthomonas_campestris_pv._campestris Xanthomonas campestris pv. campestris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IQI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IQI FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7Å</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2iqi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2iqi OCA], [https://pdbe.org/2iqi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2iqi RCSB], [https://www.ebi.ac.uk/pdbsum/2iqi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2iqi ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2iqi TOPSAN]</span></td></tr> |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q8PCT0_XANCP Q8PCT0_XANCP] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iq/2iqi_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iq/2iqi_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2iqi ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Almo | + | [[Category: Xanthomonas campestris pv. campestris]] |
| - | [[Category: Bain | + | [[Category: Almo SC]] |
| - | [[Category: Bonanno | + | [[Category: Bain KT]] |
| - | [[Category: Burley | + | [[Category: Bonanno JB]] |
| - | [[Category: Gilmore | + | [[Category: Burley SK]] |
| - | [[Category: Mckenzie | + | [[Category: Gilmore J]] |
| - | + | [[Category: Mckenzie C]] | |
| - | [[Category: Pelletier | + | [[Category: Pelletier L]] |
| - | [[Category: Wasserman | + | [[Category: Wasserman S]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal structure of protein XCC0632 from Xanthomonas campestris, Pfam DUF330
| |||||||||||
