1wvt

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:55, 6 November 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of uncharacterized protein ST2180 from Sulfolobus tokodaii==
==Crystal structure of uncharacterized protein ST2180 from Sulfolobus tokodaii==
-
<StructureSection load='1wvt' size='340' side='right' caption='[[1wvt]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
+
<StructureSection load='1wvt' size='340' side='right'caption='[[1wvt]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1wvt]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulto Sulto]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WVT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1WVT FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1wvt]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Sulfurisphaera_tokodaii_str._7 Sulfurisphaera tokodaii str. 7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WVT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WVT FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ST2180 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=273063 SULTO])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wvt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wvt OCA], [http://pdbe.org/1wvt PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1wvt RCSB], [http://www.ebi.ac.uk/pdbsum/1wvt PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wvt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wvt OCA], [https://pdbe.org/1wvt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wvt RCSB], [https://www.ebi.ac.uk/pdbsum/1wvt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wvt ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q96YJ2_SULTO Q96YJ2_SULTO]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wv/1wvt_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wv/1wvt_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wvt ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 30: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Sulto]]
+
[[Category: Large Structures]]
-
[[Category: Kumagai, I]]
+
[[Category: Sulfurisphaera tokodaii str. 7]]
-
[[Category: Sasaki, T]]
+
[[Category: Kumagai I]]
-
[[Category: Tanaka, I]]
+
[[Category: Sasaki T]]
-
[[Category: Tanaka, Y]]
+
[[Category: Tanaka I]]
-
[[Category: Tsumoto, K]]
+
[[Category: Tanaka Y]]
-
[[Category: Yasutake, Y]]
+
[[Category: Tsumoto K]]
-
[[Category: Structural genomic]]
+
[[Category: Yasutake Y]]
-
[[Category: Unknown function]]
+

Current revision

Crystal structure of uncharacterized protein ST2180 from Sulfolobus tokodaii

PDB ID 1wvt

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools