2noq

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==Structure of ribosome-bound cricket paralysis virus IRES RNA==
==Structure of ribosome-bound cricket paralysis virus IRES RNA==
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<StructureSection load='2noq' size='340' side='right' caption='[[2noq]], [[Resolution|resolution]] 7.30&Aring;' scene=''>
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<SX load='2noq' size='340' side='right' viewer='molstar' caption='[[2noq]], [[Resolution|resolution]] 7.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2noq]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NOQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2NOQ FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2noq]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Cricket_paralysis_virus Cricket paralysis virus] and [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NOQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NOQ FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2noq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2noq OCA], [http://pdbe.org/2noq PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2noq RCSB], [http://www.ebi.ac.uk/pdbsum/2noq PDBsum]</span></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 7.3&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2noq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2noq OCA], [https://pdbe.org/2noq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2noq RCSB], [https://www.ebi.ac.uk/pdbsum/2noq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2noq ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/RL5_YEAST RL5_YEAST]] Binds 5S RNA and is required for 60S subunit assembly. [[http://www.uniprot.org/uniprot/RL11B_YEAST RL11B_YEAST]] Binds to 5S ribosomal RNA.
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[https://www.uniprot.org/uniprot/RS5_YEAST RS5_YEAST]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/no/2noq_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/no/2noq_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2noq ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
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<references/>
<references/>
__TOC__
__TOC__
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</StructureSection>
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</SX>
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[[Category: Cricket paralysis virus]]
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[[Category: Large Structures]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
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[[Category: Connell, S R]]
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[[Category: Connell SR]]
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[[Category: Dabrowski, M]]
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[[Category: Dabrowski M]]
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[[Category: Giesebrecht, J]]
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[[Category: Giesebrecht J]]
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[[Category: Lescoute, A]]
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[[Category: Lescoute A]]
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[[Category: Mielke, T]]
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[[Category: Mielke T]]
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[[Category: Penczek, P A]]
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[[Category: Penczek PA]]
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[[Category: Schroeer, B]]
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[[Category: Schroeer B]]
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[[Category: Schuler, M]]
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[[Category: Schuler M]]
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[[Category: Spahn, C M.T]]
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[[Category: Spahn CMT]]
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[[Category: Westhof, E]]
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[[Category: Westhof E]]
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[[Category: Internal initiation]]
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[[Category: Ires rna]]
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[[Category: Ribosome]]
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[[Category: Translation]]
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Current revision

Structure of ribosome-bound cricket paralysis virus IRES RNA

2noq, resolution 7.30Å

Proteopedia Page Contributors and Editors (what is this?)

OCA

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