1c6r

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:48, 9 August 2023) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
 +
==CRYSTAL STRUCTURE OF REDUCED CYTOCHROME C6 FROM THE GREEN ALGAE SCENEDESMUS OBLIQUUS==
==CRYSTAL STRUCTURE OF REDUCED CYTOCHROME C6 FROM THE GREEN ALGAE SCENEDESMUS OBLIQUUS==
-
<StructureSection load='1c6r' size='340' side='right' caption='[[1c6r]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
+
<StructureSection load='1c6r' size='340' side='right'caption='[[1c6r]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1c6r]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Acutodesmus_obliquus Acutodesmus obliquus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C6R OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1C6R FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1c6r]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Tetradesmus_obliquus Tetradesmus obliquus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C6R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1C6R FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1c6r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1c6r OCA], [http://pdbe.org/1c6r PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1c6r RCSB], [http://www.ebi.ac.uk/pdbsum/1c6r PDBsum]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1c6r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1c6r OCA], [https://pdbe.org/1c6r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1c6r RCSB], [https://www.ebi.ac.uk/pdbsum/1c6r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1c6r ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CYC6_TETOB CYC6_TETOB]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c6/1c6r_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c6/1c6r_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1c6r ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 25: Line 29:
</div>
</div>
<div class="pdbe-citations 1c6r" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 1c6r" style="background-color:#fffaf0;"></div>
- 
-
==See Also==
 
-
*[[Cytochrome c|Cytochrome c]]
 
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Acutodesmus obliquus]]
+
[[Category: Large Structures]]
-
[[Category: Huber, R]]
+
[[Category: Tetradesmus obliquus]]
-
[[Category: Mann, K]]
+
[[Category: Huber R]]
-
[[Category: Reuter, W]]
+
[[Category: Mann K]]
-
[[Category: Schnackenberg, J]]
+
[[Category: Reuter W]]
-
[[Category: Than, M E]]
+
[[Category: Schnackenberg J]]
-
[[Category: Wiegand, G]]
+
[[Category: Than ME]]
-
[[Category: Cytochrome-c6]]
+
[[Category: Wiegand G]]
-
[[Category: Electron transport]]
+
-
[[Category: Electron transport protein]]
+
-
[[Category: Photosynthesis]]
+
-
[[Category: Reduced state]]
+

Current revision

CRYSTAL STRUCTURE OF REDUCED CYTOCHROME C6 FROM THE GREEN ALGAE SCENEDESMUS OBLIQUUS

PDB ID 1c6r

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools